Gm12774 Pseudogene Detail

Summary

• Symbol
  Gm12774
• Name
  predicted gene 12774

• Feature Type
  pseudogene
• IDs
  MGI:3650283
  NCBI Gene: 115486445
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:34083084-34083499 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 19.58 cM

Strain
Comparison

• SNPs within 2kb
  83 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650283	pseudogene	Chr7:34083084-34083587 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013867	pseudogene	Chr7:33660231-33660646 (+)
A/J	MGP_AJ_G0013882	pseudogene	Chr7:32827237-32827652 (+)
AKR/J	MGP_AKRJ_G0013822	pseudogene	Chr7:33600361-33600774 (+)
BALB/cJ	MGP_BALBcJ_G0013850	pseudogene	Chr7:33115702-33116117 (+)
C3H/HeJ	MGP_C3HHeJ_G0013679	pseudogene	Chr7:34493999-34494414 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0014267	pseudogene	Chr7:35371677-35372092 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0013346	pseudogene	Chr7:25608067-25608482 (+)
CBA/J	MGP_CBAJ_G0013654	pseudogene	Chr7:36471498-36471913 (+)
DBA/2J	MGP_DBA2J_G0013738	pseudogene	Chr7:32672914-32673329 (+)
FVB/NJ	MGP_FVBNJ_G0013733	pseudogene	Chr7:32585551-32585966 (+)
LP/J	MGP_LPJ_G0013810	pseudogene	Chr7:34025430-34025843 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013758	pseudogene	Chr7:35527878-35528293 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014233	pseudogene	Chr7:33132417-33132832 (+)
PWK/PhJ	MGP_PWKPhJ_G0013159	pseudogene	Chr7:25986816-25987231 (+)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0013402	pseudogene	Chr7:33675015-33675430 (+)

Homology

• Gene Tree
  Gm12774
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000082684 (Evidence)
• NCBI Gene
  115486445

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082684	Ensembl Gene Model | MGI Sequence Detail	416	C57BL/6J
transcript	ENSMUST00000117881	Ensembl | MGI Sequence Detail	416	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;