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Gm16287 Gene Detail
Summary
  • Symbol
    Gm16287
  • Name
    predicted gene 16287
  • Synonyms
    ENSMUSG00000073739
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3650322
    NCBI Gene: 100038595
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:138902718-138907966 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 70.58 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    265 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3650322
 lncRNA gene Chr4:138902716-138907966 (-)
129S1/SvImJ MGP_129S1SvImJ_G0003981
 antisense lncRNA gene Chr4:141995944-142001194 (-)
A/J MGP_AJ_G0003962
 antisense lncRNA gene Chr4:135888859-135894105 (-)
AKR/J MGP_AKRJ_G0003939
 antisense lncRNA gene Chr4:139784244-139789443 (-)
BALB/cJ MGP_BALBcJ_G0003948
 antisense lncRNA gene Chr4:136567889-136573090 (-)
C3H/HeJ MGP_C3HHeJ_G0003895
 antisense lncRNA gene Chr4:140164712-140169913 (-)
C57BL/6NJ MGP_C57BL6NJ_G0004096
 antisense lncRNA gene Chr4:147020915-147026165 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003582
 antisense lncRNA gene Chr4:128859464-128864841 (-)
CAST/EiJ MGP_CASTEiJ_G0003858
 antisense lncRNA gene Chr4:138341057-138346314 (-)
CBA/J MGP_CBAJ_G0003888
 antisense lncRNA gene Chr4:151274745-151279944 (-)
DBA/2J MGP_DBA2J_G0003904
 antisense lncRNA gene Chr4:136289028-136294229 (-)
FVB/NJ MGP_FVBNJ_G0003923
 antisense lncRNA gene Chr4:135307481-135312637 (-)
LP/J MGP_LPJ_G0003984
 antisense lncRNA gene Chr4:142068955-142074205 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0003911
 antisense lncRNA gene Chr4:155159808-155165058 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0004091
 antisense lncRNA gene Chr4:140312819-140318069 (-)
PWK/PhJ MGP_PWKPhJ_G0003812
 antisense lncRNA gene Chr4:133135117-133140422 (-)
SPRET/EiJ MGP_SPRETEiJ_G0003758
 antisense lncRNA gene Chr4:136073830-136079329 (-)
WSB/EiJ MGP_WSBEiJ_G0003894
 antisense lncRNA gene Chr4:140563542-140568779 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    5
  • Chemically induced (other)
    2
  • Gene trapped
    2
  • Targeted
    1
  • Genomic Mutations
    3 involving Gm16287
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
  • All Sequences
    24
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100038595 NCBI Gene Model | MGI Sequence Detail 5249 C57BL/6J ±  kb
transcript NR_033543 RefSeq | MGI Sequence Detail 2322 C57BL/6  
polypeptide Q3URX4 UniProt | EBI | MGI Sequence Detail 105 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
Other
Accession IDs
less
MGI:3642797
References
more
  • Summaries
    All 16
    Phenotypes 5
  • Earliest
    J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
  • Latest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory