Gm14125 Pseudogene Detail

Summary

• Symbol
  Gm14125
• Name
  predicted gene 14125

• Feature Type
  pseudogene
• IDs
  MGI:3650328
  NCBI Gene: 100417574
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr2:150147681-150148436 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 74.28 cM

Strain
Comparison

• SNPs within 2kb
  119 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650328	pseudogene	Chr2:150147665-150148537 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0039698	pseudogene	Chr2:154738832-154739820 (+)
A/J	MGP_AJ_G0039696	pseudogene	Chr2:148500094-148501082 (+)
AKR/J	MGP_AKRJ_G0039622	pseudogene	Chr2:152764562-152765550 (+)
BALB/cJ	MGP_BALBcJ_G0039666	pseudogene	Chr2:148942138-148943126 (+)
C3H/HeJ	MGP_C3HHeJ_G0039328	pseudogene	Chr2:153242653-153243641 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0040227	pseudogene	Chr2:159262158-159263146 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0038449	pseudogene	Chr2:153524711-153525695 (+)
CBA/J	MGP_CBAJ_G0039299	pseudogene	Chr2:165088438-165089426 (+)
DBA/2J	MGP_DBA2J_G0039493	pseudogene	Chr2:147731644-147732632 (+)
FVB/NJ	MGP_FVBNJ_G0039451	pseudogene	Chr2:146195192-146196180 (+)
LP/J	MGP_LPJ_G0039532	pseudogene	Chr2:154877733-154878721 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039453	pseudogene	Chr2:169248206-169249190 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040328	pseudogene	Chr2:152753070-152754058 (+)
PWK/PhJ	MGP_PWKPhJ_G0038125	pseudogene	Chr2:147428701-147429685 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0037874	pseudogene	Chr2:151806922-151807917 (-)
WSB/EiJ	MGP_WSBEiJ_G0038682	pseudogene	Chr2:153684052-153685036 (+)

Homology

• Gene Tree
  Gm14125
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm14125
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000084320 (Evidence)
• NCBI Gene
  100417574

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084320	Ensembl Gene Model | MGI Sequence Detail	756	C57BL/6J
transcript	ENSMUST00000120921	Ensembl | MGI Sequence Detail	756	Not Applicable

References

• Summaries
  All 8

  Phenotypes 3
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17

TSS for Gm14125:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr20698	Chr2:150147670-150147677 (+)	-7 bp