Gm11679 Pseudogene Detail

Summary

• Symbol
  Gm11679
• Name
  predicted gene 11679

• Feature Type
  pseudogene
• IDs
  MGI:3650353
  NCBI Gene: 100504331
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:111933626-111934404 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 75.72 cM

Strain
Comparison

• SNPs within 2kb
  12 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650353	pseudogene	Chr11:111933626-111934404 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0010871	pseudogene	Chr11:115770153-115770929 (-)
A/J	MGP_AJ_G0010868	pseudogene	Chr11:110773221-110774036 (-)
AKR/J	MGP_AKRJ_G0010828	pseudogene	Chr11:114017245-114018023 (-)
BALB/cJ	MGP_BALBcJ_G0010846	pseudogene	Chr11:111176093-111176871 (-)
C3H/HeJ	MGP_C3HHeJ_G0010747	pseudogene	Chr11:114375419-114376197 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0011118	pseudogene	Chr11:119252897-119253675 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009725	pseudogene	Chr11:107894406-107895168 (-)
CAST/EiJ	MGP_CASTEiJ_G0010572	pseudogene	Chr11:115583320-115584162 (-)
CBA/J	MGP_CBAJ_G0010718	pseudogene	Chr11:124152666-124153481 (-)
DBA/2J	MGP_DBA2J_G0010765	pseudogene	Chr11:110220751-110221529 (-)
FVB/NJ	MGP_FVBNJ_G0010782	pseudogene	Chr11:109674182-109674958 (-)
LP/J	MGP_LPJ_G0010853	pseudogene	Chr11:116177484-116178262 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010758	pseudogene	Chr11:123303785-123304563 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011097	pseudogene	Chr11:114656830-114657623 (-)
PWK/PhJ	MGP_PWKPhJ_G0010462	pseudogene	Chr11:111390250-111391043 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0010277	pseudogene	Chr11:114444183-114444983 (-)
WSB/EiJ	MGP_WSBEiJ_G0010623	pseudogene	Chr11:114598111-114598887 (-)

Homology

• Gene Tree
  Gm11679
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000081088 (Evidence)
• NCBI Gene
  100504331

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081088	Ensembl Gene Model | MGI Sequence Detail	779	C57BL/6J
transcript	ENSMUST00000121830	Ensembl | MGI Sequence Detail	779	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;