Gm12785 Pseudogene Detail

Summary

• Symbol
  Gm12785
• Name
  predicted gene 12785

• Feature Type
  pseudogene
• IDs
  MGI:3650357
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:101067613-101067784 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 46.33 cM

Strain
Comparison

• SNPs within 2kb
  94 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650357	pseudogene	Chr4:101067613-101067784 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0012789	pseudogene	Chr4:101491234-101491405 (-)
A/J	MGP_AJ_G0012774	pseudogene	Chr4:97956583-97956754 (-)
AKR/J	MGP_AKRJ_G0012745	pseudogene	Chr4:100318932-100319103 (-)
BALB/cJ	MGP_BALBcJ_G0012755	pseudogene	Chr4:98156995-98157166 (-)
C3H/HeJ	MGP_C3HHeJ_G0012612	pseudogene	Chr4:101117872-101118043 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0013087	pseudogene	Chr4:105336148-105336319 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0012367	pseudogene	Chr4:98910891-98912387 (-)
CBA/J	MGP_CBAJ_G0012588	pseudogene	Chr4:108646102-108646273 (-)
DBA/2J	MGP_DBA2J_G0012651	pseudogene	Chr4:97657625-97657796 (-)
FVB/NJ	MGP_FVBNJ_G0012655	pseudogene	Chr4:96490932-96491103 (-)
LP/J	MGP_LPJ_G0012726	pseudogene	Chr4:101794104-101794275 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012664	pseudogene	Chr4:114195048-114195219 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013094	pseudogene	Chr4:100575599-100575770 (-)
PWK/PhJ	MGP_PWKPhJ_G0012190	pseudogene	Chr4:95820362-95821915 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0011999	pseudogene	Chr4:98030270-98031754 (-)
WSB/EiJ	MGP_WSBEiJ_G0012393	pseudogene	Chr4:100741174-100741345 (-)

Homology

• Gene Tree
  Gm12785
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving Gm12785
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000082928 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082928	Ensembl Gene Model | MGI Sequence Detail	172	C57BL/6J
transcript	ENSMUST00000122052	Ensembl | MGI Sequence Detail	172	Not Applicable

References

• Summaries
  All 6

  Phenotypes 3
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;