Gm12782 Pseudogene Detail

Summary

• Symbol
  Gm12782
• Name
  predicted gene 12782

• Feature Type
  pseudogene
• IDs
  MGI:3650361
  NCBI Gene: 100418006
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:33480254-33480962 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 19.37 cM

Strain
Comparison

• SNPs within 2kb
  151 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650361	pseudogene	Chr7:33480242-33480968 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0013860	pseudogene	Chr7:32977079-32977805 (-)
A/J	MGP_AJ_G0013876	pseudogene	Chr7:32205321-32206047 (-)
AKR/J	MGP_AKRJ_G0013815	pseudogene	Chr7:32926187-32926913 (-)
BALB/cJ	MGP_BALBcJ_G0013843	pseudogene	Chr7:32387137-32387863 (-)
C3H/HeJ	MGP_C3HHeJ_G0013672	pseudogene	Chr7:33806002-33806728 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0014260	pseudogene	Chr7:34702263-34702989 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0013341	pseudogene	Chr7:24930757-24931482 (-)
CBA/J	MGP_CBAJ_G0013647	pseudogene	Chr7:35720628-35721354 (-)
DBA/2J	MGP_DBA2J_G0013731	pseudogene	Chr7:31939902-31940627 (-)
FVB/NJ	MGP_FVBNJ_G0013726	pseudogene	Chr7:31953777-31954503 (-)
LP/J	MGP_LPJ_G0013803	pseudogene	Chr7:33260667-33261393 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013751	pseudogene	Chr7:34703550-34704276 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014227	pseudogene	Chr7:32424207-32424932 (-)
PWK/PhJ	MGP_PWKPhJ_G0013154	pseudogene	Chr7:25355767-25356492 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0012924	pseudogene	Chr7:22068277-22069007 (-)
WSB/EiJ	MGP_WSBEiJ_G0013396	pseudogene	Chr7:33007469-33008195 (-)

Homology

• Gene Tree
  Gm12782
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000081714 (Evidence)
• NCBI Gene
  100418006

Representative Sequences			Length	Strain/Species
genomic	100418006	NCBI Gene Model | MGI Sequence Detail	709	C57BL/6J

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;