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Pramel25 Gene Detail
Summary
  • Symbol
    Pramel25
  • Name
    PRAME like 25
  • Synonyms
    Gm13023, MGC:91194
  • Feature Type
    protein coding gene
  • IDs
    MGI:3650478
    NCBI Gene: 194227
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr4:143515922-143522145 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 77.96 cM
Strain
Comparison
more
  • SNPs within 2kb
    223 from dbSNP Build 142
  • Strain Annotations
    14
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3650478
 protein coding gene Chr4:143515904-143522155 (+)
129S1/SvImJ MGP_129S1SvImJ_G0019993
 protein coding gene Chr12:89131761-89142987 (-)
A/J MGP_AJ_G0029043
 protein coding gene Chr4:140662558-140674231 (+)
AKR/J MGP_AKRJ_G0028994
 protein coding gene Chr4:144690676-144723218 (+)
BALB/cJ MGP_BALBcJ_G0019931
 protein coding gene Chr12:86165449-86177479 (-)
C3H/HeJ MGP_C3HHeJ_G0019733
 protein coding gene Chr12:88382651-88387411 (+)
C57BL/6NJ MGP_C57BL6NJ_G0029514
 protein coding gene Chr4:152497990-152502918 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0014109
 protein coding gene Chr1:40266271-40266878 (+)
CAST/EiJ MGP_CASTEiJ_G0015348
 protein coding gene Chr1:44525999-44526617 (+)
CBA/J no annotation
DBA/2J MGP_DBA2J_G0028901
 protein coding gene Chr4:141476418-141481172 (-)
FVB/NJ no annotation
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0029540
 protein coding gene Chr4:145231377-145234274 (+)
PWK/PhJ MGP_PWKPhJ_G0015132
 protein coding gene Chr1:42670729-42671347 (+)
SPRET/EiJ MGP_SPRETEiJ_G0014914
 protein coding gene Chr1:44444680-44445296 (+)
WSB/EiJ MGP_WSBEiJ_G0028284
 protein coding gene Chr4:145977726-145982413 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    738
  • Tissues
    1
  • cDNA Data
    80
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000066031 Ensembl Gene Model | MGI Sequence Detail 6224 C57BL/6J ±  kb
transcript ENSMUST00000085144 Ensembl | MGI Sequence Detail 1810 Not Applicable  
polypeptide ENSMUSP00000082232 Ensembl | MGI Sequence Detail 498 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    5 Sequences
  • InterPro Domains
    IPR032675 Leucine-rich repeat domain superfamily
    IPR026271 PRAME
    IPR050694 PRAME domain-containing protein
Molecular
Reagents
less
  • All nucleic 84
    cDNA 80
    Primer pair 4

    Microarray probesets 1
Other
Accession IDs
less
MGI:3664301, MGI:6430522
References
more
  • Summaries
    All 17
    Developmental Gene Expression 1
    Gene Ontology 1
    Phenotypes 3
  • Earliest
    J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
  • Latest
    J:174767 Tang F, et al., Deterministic and stochastic allele specific gene expression in single mouse blastomeres. PLoS One. 2011;6(6):e21208
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory