Gm11868 Pseudogene Detail

Summary

• Symbol
  Gm11868
• Name
  predicted gene 11868

• Feature Type
  pseudogene
• IDs
  MGI:3650507
  NCBI Gene: 667251
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:18844202-18845679 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 7.28 cM

Strain
Comparison

• SNPs within 2kb
  132 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650507	pseudogene	Chr4:18844005-18845867 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0012541	pseudogene	Chr4:15841878-15843296 (-)
A/J	MGP_AJ_G0012534	pseudogene	Chr4:15385656-15388772 (-)
AKR/J	MGP_AKRJ_G0012500	pseudogene	Chr4:15698968-15701720 (-)
BALB/cJ	MGP_BALBcJ_G0012520	pseudogene	Chr4:15351500-15353629 (-)
C3H/HeJ	MGP_C3HHeJ_G0012380	pseudogene	Chr4:15826469-15827833 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0012833	pseudogene	Chr4:16491790-16494936 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0012141	pseudogene	Chr4:15630897-15632315 (-)
CBA/J	MGP_CBAJ_G0012359	pseudogene	Chr4:16939841-16942173 (-)
DBA/2J	MGP_DBA2J_G0012413	pseudogene	Chr4:15178929-15181207 (-)
FVB/NJ	MGP_FVBNJ_G0012417	pseudogene	Chr4:14939275-14940693 (-)
LP/J	MGP_LPJ_G0012487	pseudogene	Chr4:15864583-15868828 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0012835	pseudogene	Chr4:15607483-15608758 (-)
PWK/PhJ	MGP_PWKPhJ_G0011972	pseudogene	Chr4:15120755-15122407 (-)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0012166	pseudogene	Chr4:15701768-15705921 (-)

Homology

• Gene Tree
  Gm11868
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19
• RefSeq
  1

• Ensembl
  ENSMUSG00000050550 (Evidence)
• NCBI Gene
  667251

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000050550	Ensembl Gene Model | MGI Sequence Detail	1478	C57BL/6J
transcript	ENSMUST00000121594	Ensembl | MGI Sequence Detail	1478	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;