Gm11982 Pseudogene Detail

Summary

• Symbol
  Gm11982
• Name
  predicted gene 11982

• Feature Type
  pseudogene
• IDs
  MGI:3650518
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:6775496-6775809 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 4.67 cM

Strain
Comparison

• SNPs within 2kb
  140 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650518	pseudogene	Chr11:6775496-6775809 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0010578	pseudogene	Chr11:3987469-3987782 (-)
A/J	MGP_AJ_G0010571	pseudogene	Chr11:3793839-3794152 (-)
AKR/J	MGP_AKRJ_G0010532	pseudogene	Chr11:3980603-3980916 (-)
BALB/cJ	MGP_BALBcJ_G0010547	pseudogene	Chr11:3799688-3800001 (-)
C3H/HeJ	MGP_C3HHeJ_G0010468	pseudogene	Chr11:3882276-3882589 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0010816	pseudogene	Chr11:4073053-4073366 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009484	pseudogene	Chr11:3669517-3669836 (-)
CAST/EiJ	MGP_CASTEiJ_G0010292	pseudogene	Chr11:3855548-3855859 (-)
CBA/J	MGP_CBAJ_G0010441	pseudogene	Chr11:4547259-4547572 (-)
DBA/2J	MGP_DBA2J_G0010470	pseudogene	Chr11:3720299-3720612 (-)
FVB/NJ	MGP_FVBNJ_G0010488	pseudogene	Chr11:3741032-3741345 (-)
LP/J	MGP_LPJ_G0010560	pseudogene	Chr11:4040549-4040862 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010464	pseudogene	Chr11:4085354-4085667 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010793	pseudogene	Chr11:4015850-4016163 (-)
PWK/PhJ	MGP_PWKPhJ_G0010193	pseudogene	Chr11:3745330-3745643 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0010007	pseudogene	Chr11:3954518-3954824 (-)
WSB/EiJ	MGP_WSBEiJ_G0010353	pseudogene	Chr11:3833381-3833694 (-)

Homology

• Gene Tree
  Gm11982
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000082897 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082897	Ensembl Gene Model | MGI Sequence Detail	314	C57BL/6J
transcript	ENSMUST00000121480	Ensembl | MGI Sequence Detail	314	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;