Gm11983 Pseudogene Detail

Summary

• Symbol
  Gm11983
• Name
  predicted gene 11983

• Feature Type
  pseudogene
• IDs
  MGI:3650519
  NCBI Gene: 100418324
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:6785626-6787654 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 4.67 cM

Strain
Comparison

• SNPs within 2kb
  162 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650519	pseudogene	Chr11:6785607-6787744 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0018031	protein coding gene	Chr11:3997534-3999601 (-)
A/J	MGP_AJ_G0018004	protein coding gene	Chr11:3807771-3809838 (-)
AKR/J	MGP_AKRJ_G0017968	protein coding gene	Chr11:3993379-3995446 (-)
BALB/cJ	MGP_BALBcJ_G0017972	protein coding gene	Chr11:3810548-3812591 (-)
C3H/HeJ	MGP_C3HHeJ_G0017785	protein coding gene	Chr11:3892263-3894306 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0018424	protein coding gene	Chr11:4083741-4085769 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0016082	protein coding gene	Chr11:3679650-3681726 (-)
CAST/EiJ	MGP_CASTEiJ_G0017347	protein coding gene	Chr11:3866480-3868537 (-)
CBA/J	MGP_CBAJ_G0017760	protein coding gene	Chr11:4568340-4570368 (-)
DBA/2J	MGP_DBA2J_G0017870	protein coding gene	Chr11:3731064-3733092 (-)
FVB/NJ	MGP_FVBNJ_G0017862	protein coding gene	Chr11:3752282-3754325 (-)
LP/J	MGP_LPJ_G0017941	protein coding gene	Chr11:4053906-4055949 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0017888	protein coding gene	Chr11:4103615-4105682 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0018464	protein coding gene	Chr11:4029119-4031147 (-)
PWK/PhJ	MGP_PWKPhJ_G0017127	protein coding gene	Chr11:3758303-3760370 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0016924	protein coding gene	Chr11:3964254-3966320 (-)
WSB/EiJ	MGP_WSBEiJ_G0017401	protein coding gene	Chr11:3845294-3847322 (-)

Homology

• Gene Tree
  Gm11983
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000099102 (Evidence)
• NCBI Gene
  100418324

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000099102	Ensembl Gene Model | MGI Sequence Detail	2029	C57BL/6J
transcript	ENSMUST00000184257	Ensembl | MGI Sequence Detail	2029	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;