Gm13630 Gene Detail

Summary

• Symbol
  Gm13630
• Name
  predicted gene 13630

• Feature Type
  lncRNA gene
• IDs
  MGI:3650561
  NCBI Gene: 102639009
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:66243015-66251933 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 39.13 cM

Strain
Comparison

• SNPs within 2kb
  495 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650561	lncRNA gene	Chr2:66239838-66251933 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0015423	unclassified non-coding RNA gene	Chr2:66263333-66275295 (+)
A/J	MGP_AJ_G0015398	unclassified non-coding RNA gene	Chr2:63678344-63690399 (+)
AKR/J	MGP_AKRJ_G0015362	unclassified non-coding RNA gene	Chr2:65416456-65429650 (+)
BALB/cJ	MGP_BALBcJ_G0015362	unclassified non-coding RNA gene	Chr2:63866457-63878753 (+)
C3H/HeJ	MGP_C3HHeJ_G0015186	unclassified non-coding RNA gene	Chr2:65598262-65612147 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0015816	unclassified non-coding RNA gene	Chr2:68219439-68232512 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013556	unclassified non-coding RNA gene	Chr2:61035778-61047313 (+)
CAST/EiJ	MGP_CASTEiJ_G0014737	unclassified non-coding RNA gene	Chr2:65663257-65680374 (+)
CBA/J	MGP_CBAJ_G0015165	unclassified non-coding RNA gene	Chr2:70766822-70778785 (+)
DBA/2J	MGP_DBA2J_G0015260	unclassified non-coding RNA gene	Chr2:63330569-63342847 (+)
FVB/NJ	MGP_FVBNJ_G0015267	unclassified non-coding RNA gene	Chr2:62742580-62754571 (+)
LP/J	MGP_LPJ_G0015340	unclassified non-coding RNA gene	Chr2:66093161-66107467 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015293	unclassified non-coding RNA gene	Chr2:72736549-72750961 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015855	unclassified non-coding RNA gene	Chr2:65486729-65498705 (+)
PWK/PhJ	MGP_PWKPhJ_G0014525	unclassified non-coding RNA gene	Chr2:63149937-63162596 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0014313	unclassified non-coding RNA gene	Chr2:65658136-65670871 (+)
WSB/EiJ	MGP_WSBEiJ_G0014844	unclassified non-coding RNA gene	Chr2:65858610-65871492 (+)

Homology

• Gene Tree
  Gm13630
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm13630
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  27
• RefSeq
  5

• Ensembl
  ENSMUSG00000085386 (Evidence)
• NCBI Gene
  102639009

Representative Sequences			Length	Strain/Species
genomic	102639009	NCBI Gene Model | MGI Sequence Detail	8919	C57BL/6J
transcript	AK034270	GenBank | ENA | DDBJ | MGI Sequence Detail	3651	C57BL/6J

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 9

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;