Gm12495 Pseudogene Detail

Summary

• Symbol
  Gm12495
• Name
  predicted gene 12495

• Feature Type
  pseudogene
• IDs
  MGI:3650574
  NCBI Gene: 100041197
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:53308226-53308672 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 28.62 cM

Strain
Comparison

• SNPs within 2kb
  110 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650574	pseudogene	Chr4:53308226-53308672 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0012659	pseudogene	Chr4:51933573-51934019 (+)
A/J	MGP_AJ_G0012648	pseudogene	Chr4:49947100-49947546 (+)
AKR/J	MGP_AKRJ_G0012618	pseudogene	Chr4:51313910-51314356 (+)
BALB/cJ	MGP_BALBcJ_G0012631	pseudogene	Chr4:50127489-50127935 (+)
C3H/HeJ	MGP_C3HHeJ_G0012491	pseudogene	Chr4:51863016-51863462 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012956	pseudogene	Chr4:53850088-53850534 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011261	pseudogene	Chr4:46915608-46916068 (+)
CAST/EiJ	MGP_CASTEiJ_G0012246	pseudogene	Chr4:51507399-51507848 (+)
CBA/J	MGP_CBAJ_G0012471	pseudogene	Chr4:55676470-55676918 (+)
DBA/2J	MGP_DBA2J_G0012529	pseudogene	Chr4:49921102-49921550 (+)
FVB/NJ	MGP_FVBNJ_G0012529	pseudogene	Chr4:49145209-49145655 (+)
LP/J	MGP_LPJ_G0012600	pseudogene	Chr4:52039814-52040260 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012537	pseudogene	Chr4:58919641-58920087 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012960	pseudogene	Chr4:51544305-51544751 (+)
PWK/PhJ	MGP_PWKPhJ_G0012073	pseudogene	Chr4:49873649-49874112 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0011886	pseudogene	Chr4:50835153-50835616 (+)
WSB/EiJ	MGP_WSBEiJ_G0012268	pseudogene	Chr4:51444224-51444670 (+)

Homology

• Gene Tree
  Gm12495
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000083735 (Evidence)
• NCBI Gene
  100041197

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083735	Ensembl Gene Model | MGI Sequence Detail	447	C57BL/6J
transcript	ENSMUST00000119750	Ensembl | MGI Sequence Detail	447	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;