Sap30bpos Gene Detail

Summary

• Symbol
  Sap30bpos
• Name
  SAP30 binding protein, opposite strand
• Synonyms
  Gm11721

• Feature Type
  antisense lncRNA gene
  BioType Conflict
  
• IDs
  MGI:3650575
  NCBI Gene: 100503650
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:115837276-115842931 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 80.91 cM

Strain
Comparison

• SNPs within 2kb
  264 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650575	antisense lncRNA gene	Chr11:115837276-115842931 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0003101	antisense lncRNA gene	Chr11:120024163-120029820 (-)
A/J	MGP_AJ_G0003079	antisense lncRNA gene	Chr11:114775531-114781186 (-)
AKR/J	MGP_AKRJ_G0003060	antisense lncRNA gene	Chr11:118204948-118210604 (-)
BALB/cJ	MGP_BALBcJ_G0003066	antisense lncRNA gene	Chr11:115190307-115195963 (-)
C3H/HeJ	MGP_C3HHeJ_G0003022	antisense lncRNA gene	Chr11:118551238-118556893 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0003208	antisense lncRNA gene	Chr11:123684093-123689748 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002743	antisense lncRNA gene	Chr11:111798915-111804583 (-)
CAST/EiJ	MGP_CASTEiJ_G0002991	antisense lncRNA gene	Chr11:119896229-119901911 (-)
CBA/J	MGP_CBAJ_G0003019	antisense lncRNA gene	Chr11:128577388-128583043 (-)
DBA/2J	MGP_DBA2J_G0003024	antisense lncRNA gene	Chr11:114197582-114203238 (-)
FVB/NJ	MGP_FVBNJ_G0003044	antisense lncRNA gene	Chr11:113707378-113713033 (-)
LP/J	MGP_LPJ_G0003099	antisense lncRNA gene	Chr11:120404198-120409853 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003032	antisense lncRNA gene	Chr11:127689702-127695359 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003212	antisense lncRNA gene	Chr11:118855196-118860853 (-)
PWK/PhJ	MGP_PWKPhJ_G0002949	antisense lncRNA gene	Chr11:115515564-115521240 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0002893	antisense lncRNA gene	Chr11:118608123-118613812 (-)
WSB/EiJ	MGP_WSBEiJ_G0003021	antisense lncRNA gene	Chr11:118819417-118825072 (-)

Homology

• Gene Tree
  Sap30bpos
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000087064 (Evidence)
• NCBI Gene
  100503650

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000087064	Ensembl Gene Model | MGI Sequence Detail	5656	C57BL/6J
transcript	ENSMUST00000132264	Ensembl | MGI Sequence Detail	2352	Not Applicable

References

• Summaries
  All 6

  Phenotypes 1
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:141210 Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI), Mouse Gene Trap Data Load from dbGSS. Database Download. 2008;