Gm12765 Pseudogene Detail

Summary

• Symbol
  Gm12765
• Name
  predicted gene 12765

• Feature Type
  pseudogene
• IDs
  MGI:3650638
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:33636686-33637662 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 19.38 cM

Strain
Comparison

• SNPs within 2kb
  197 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650638	pseudogene	Chr7:33636686-33637662 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0040562	pseudogene	Chr7:33143944-33144921 (+)
A/J	MGP_AJ_G0040552	pseudogene	Chr7:32358057-32359034 (+)
AKR/J	MGP_AKRJ_G0040477	pseudogene	Chr7:33075686-33076663 (+)
BALB/cJ	MGP_BALBcJ_G0040548	pseudogene	Chr7:32545150-32546127 (+)
C3H/HeJ	MGP_C3HHeJ_G0040182	pseudogene	Chr7:33951471-33952447 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0041210	pseudogene	Chr7:34859886-34860862 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0039232	pseudogene	Chr7:25061771-25062747 (+)
CBA/J	MGP_CBAJ_G0040147	pseudogene	Chr7:35880103-35881079 (+)
DBA/2J	MGP_DBA2J_G0040353	pseudogene	Chr7:32124459-32125429 (+)
FVB/NJ	MGP_FVBNJ_G0040295	pseudogene	Chr7:32102368-32103344 (+)
LP/J	MGP_LPJ_G0040390	pseudogene	Chr7:33437228-33438205 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0040287	pseudogene	Chr7:34899723-34900700 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0041263	pseudogene	Chr7:32592924-32593894 (+)
PWK/PhJ	MGP_PWKPhJ_G0038907	pseudogene	Chr7:25496774-25497865 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0038608	pseudogene	Chr7:22228638-22229607 (+)
WSB/EiJ	MGP_WSBEiJ_G0039482	pseudogene	Chr7:33161350-33162326 (+)

Homology

• Gene Tree
  Gm12765
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000083085 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083085	Ensembl Gene Model | MGI Sequence Detail	977	C57BL/6J
transcript	ENSMUST00000117273	Ensembl | MGI Sequence Detail	615	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;