Gm11750 Gene Detail

Summary

• Symbol
  Gm11750
• Name
  predicted gene 11750

• Feature Type
  lncRNA gene
• IDs
  MGI:3650640
  NCBI Gene: 108167940
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:118682198-118684654 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 83.31 cM

Strain
Comparison

• SNPs within 2kb
  145 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650640	lncRNA gene	Chr11:118676238-118697735 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0005326	lincRNA gene	Chr11:123132408-123134862 (+)
A/J	MGP_AJ_G0005309	lincRNA gene	Chr11:117681663-117684118 (+)
AKR/J	MGP_AKRJ_G0005288	lincRNA gene	Chr11:121243758-121246215 (+)
BALB/cJ	MGP_BALBcJ_G0005291	lincRNA gene	Chr11:118042634-118045085 (+)
C3H/HeJ	MGP_C3HHeJ_G0005240	lincRNA gene	Chr11:121553079-121555534 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0005443	lincRNA gene	Chr11:126892239-126894695 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004833	lincRNA gene	Chr11:114681723-114684211 (+)
CAST/EiJ	MGP_CASTEiJ_G0005187	lincRNA gene	Chr11:122979235-122981681 (+)
CBA/J	MGP_CBAJ_G0005229	lincRNA gene	Chr11:131812007-131814462 (+)
DBA/2J	MGP_DBA2J_G0005247	lincRNA gene	Chr11:117060857-117063313 (+)
FVB/NJ	MGP_FVBNJ_G0005272	lincRNA gene	Chr11:116719343-116721794 (+)
LP/J	MGP_LPJ_G0005328	lincRNA gene	Chr11:123449721-123452177 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0005254	lincRNA gene	Chr11:130794103-130796559 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0005447	lincRNA gene	Chr11:121906117-121908573 (+)
PWK/PhJ	MGP_PWKPhJ_G0005136	lincRNA gene	Chr11:118455273-118457716 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0005057	lincRNA gene	Chr11:121639965-121642409 (+)
WSB/EiJ	MGP_WSBEiJ_G0005235	lincRNA gene	Chr11:121864699-121867149 (+)

Homology

• Gene Tree
  Gm11750
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  3

• Ensembl
  ENSMUSG00000085059 (Evidence)
• NCBI Gene
  108167940

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000085059	Ensembl Gene Model | MGI Sequence Detail	2457	C57BL/6J
transcript	ENSMUST00000146016	Ensembl | MGI Sequence Detail	583	Not Applicable

References

• Summaries
  All 6
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;