Gm14048 Pseudogene Detail

Summary

• Symbol
  Gm14048
• Name
  predicted gene 14048

• Feature Type
  pseudogene
• IDs
  MGI:3650660
  NCBI Gene: 100418329
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:130722786-130724053 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 63.26 cM

Strain
Comparison

• SNPs within 2kb
  171 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650660	pseudogene	Chr2:130722757-130724250 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011862	pseudogene	Chr2:134371627-134374646 (+)
A/J	MGP_AJ_G0011852	pseudogene	Chr2:128928037-128929304 (+)
AKR/J	MGP_AKRJ_G0011820	pseudogene	Chr2:132649309-132650576 (+)
BALB/cJ	MGP_BALBcJ_G0011831	pseudogene	Chr2:129299767-129301047 (+)
C3H/HeJ	MGP_C3HHeJ_G0011713	pseudogene	Chr2:133082486-133084076 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012135	pseudogene	Chr2:138514863-138516130 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0011503	pseudogene	Chr2:133356036-133357316 (+)
CBA/J	MGP_CBAJ_G0011688	pseudogene	Chr2:143665356-143666623 (+)
DBA/2J	MGP_DBA2J_G0011744	pseudogene	Chr2:128313626-128315362 (+)
FVB/NJ	MGP_FVBNJ_G0011747	pseudogene	Chr2:126949040-126950307 (+)
LP/J	MGP_LPJ_G0011811	pseudogene	Chr2:134612224-134613491 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011752	pseudogene	Chr2:147489335-147490602 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012129	pseudogene	Chr2:132608393-132609660 (+)
PWK/PhJ	MGP_PWKPhJ_G0011350	pseudogene	Chr2:127878850-127880335 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0011168	pseudogene	Chr2:131756392-131757670 (+)
WSB/EiJ	MGP_WSBEiJ_G0011524	pseudogene	Chr2:133532354-133533621 (+)

Homology

• Gene Tree
  Gm14048
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm14048
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000080989 (Evidence)
• NCBI Gene
  100418329

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000080989	Ensembl Gene Model | MGI Sequence Detail	1268	C57BL/6J
transcript	ENSMUST00000121864	Ensembl | MGI Sequence Detail	1268	Not Applicable

References

• Summaries
  All 8

  Phenotypes 3
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17