Gm12235 Pseudogene Detail

Summary

• Symbol
  Gm12235
• Name
  predicted gene 12235

• Feature Type
  pseudogene
• IDs
  MGI:3650666
  NCBI Gene: 102634307
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:55354666-55354835 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 33.08 cM

Strain
Comparison

• SNPs within 2kb
  111 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650666	pseudogene	Chr11:55354414-55354835 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0010717	pseudogene	Chr11:54995646-54995815 (-)
A/J	MGP_AJ_G0010714	pseudogene	Chr11:52949346-52949515 (-)
AKR/J	MGP_AKRJ_G0010673	pseudogene	Chr11:54674444-54674613 (-)
BALB/cJ	MGP_BALBcJ_G0010685	pseudogene	Chr11:53275031-53275200 (-)
C3H/HeJ	MGP_C3HHeJ_G0010598	pseudogene	Chr11:54609660-54609829 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0010962	pseudogene	Chr11:56661726-56661895 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009594	pseudogene	Chr11:50366477-50366646 (-)
CAST/EiJ	MGP_CASTEiJ_G0010423	pseudogene	Chr11:54651439-54651608 (-)
CBA/J	MGP_CBAJ_G0010574	pseudogene	Chr11:59357477-59357646 (-)
DBA/2J	MGP_DBA2J_G0010611	pseudogene	Chr11:52631327-52631496 (-)
FVB/NJ	MGP_FVBNJ_G0010627	pseudogene	Chr11:52299007-52299176 (-)
LP/J	MGP_LPJ_G0010698	pseudogene	Chr11:55458141-55458310 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010602	pseudogene	Chr11:60530550-60530719 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010935	pseudogene	Chr11:54697160-54697329 (-)
PWK/PhJ	MGP_PWKPhJ_G0010318	pseudogene	Chr11:53206629-53206798 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0010127	pseudogene	Chr11:54486710-54486879 (-)
WSB/EiJ	MGP_WSBEiJ_G0010480	pseudogene	Chr11:54339615-54339784 (-)

Homology

• Gene Tree
  Gm12235
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm12235
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000081107 (Evidence)
• NCBI Gene
  102634307

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081107	Ensembl Gene Model | MGI Sequence Detail	170	C57BL/6J
transcript	ENSMUST00000118596	Ensembl | MGI Sequence Detail	170	Not Applicable

References

• Summaries
  All 8

  Phenotypes 3
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6