Gm12189 Pseudogene Detail

Summary

• Symbol
  Gm12189
• Name
  predicted gene 12189

• Feature Type
  pseudogene
• IDs
  MGI:3650668
  NCBI Gene: 667286
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:49295447-49296358 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 29.45 cM

Strain
Comparison

• SNPs within 2kb
  71 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650668	pseudogene	Chr11:49295447-49296440 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010693	pseudogene	Chr11:48507917-48508828 (+)
A/J	MGP_AJ_G0010688	pseudogene	Chr11:46619073-46619984 (+)
AKR/J	MGP_AKRJ_G0010648	pseudogene	Chr11:48091200-48092111 (+)
BALB/cJ	MGP_BALBcJ_G0010662	pseudogene	Chr11:46940469-46941380 (+)
C3H/HeJ	MGP_C3HHeJ_G0010578	pseudogene	Chr11:48112939-48113850 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010940	pseudogene	Chr11:49942059-49942970 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009577	pseudogene	Chr11:44298718-44299630 (+)
CAST/EiJ	MGP_CASTEiJ_G0010401	pseudogene	Chr11:48110791-48111702 (+)
CBA/J	MGP_CBAJ_G0010551	pseudogene	Chr11:52282388-52283299 (+)
DBA/2J	MGP_DBA2J_G0010588	pseudogene	Chr11:46473578-46474489 (+)
FVB/NJ	MGP_FVBNJ_G0010602	pseudogene	Chr11:46065373-46066284 (+)
LP/J	MGP_LPJ_G0010675	pseudogene	Chr11:48827768-48828679 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010577	pseudogene	Chr11:53818018-53818929 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010914	pseudogene	Chr11:48242643-48243554 (+)
PWK/PhJ	MGP_PWKPhJ_G0010297	pseudogene	Chr11:46836940-46837851 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010106	pseudogene	Chr11:47874199-47875110 (+)
WSB/EiJ	MGP_WSBEiJ_G0010461	pseudogene	Chr11:47870468-47871379 (+)

Homology

• Gene Tree
  Gm12189
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm12189
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000084278 (Evidence)
• NCBI Gene
  667286

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084278	Ensembl Gene Model | MGI Sequence Detail	912	C57BL/6J
transcript	ENSMUST00000119779	Ensembl | MGI Sequence Detail	912	Not Applicable

References

• Summaries
  All 8

  Phenotypes 3
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6