Gm12705 Gene Detail

Summary

• Symbol
  Gm12705
• Name
  predicted gene 12705

• Feature Type
  lncRNA gene
• IDs
  MGI:3650670
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:99004651-99006538 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 45.60 cM

Strain
Comparison

• SNPs within 2kb
  145 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650670	lncRNA gene	Chr4:99004651-99006538 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0003921	antisense lncRNA gene	Chr4:99338367-99340245 (+)
A/J	MGP_AJ_G0003901	antisense lncRNA gene	Chr4:95880801-95882858 (+)
AKR/J	MGP_AKRJ_G0003878	antisense lncRNA gene	Chr4:98208664-98210551 (+)
BALB/cJ	MGP_BALBcJ_G0003887	antisense lncRNA gene	Chr4:96131960-96133837 (+)
C3H/HeJ	MGP_C3HHeJ_G0003834	antisense lncRNA gene	Chr4:99004319-99006713 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0004035	antisense lncRNA gene	Chr4:103103216-103105435 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003525	antisense lncRNA gene	Chr4:91268566-91270516 (+)
CAST/EiJ	MGP_CASTEiJ_G0003798	antisense lncRNA gene	Chr4:96792727-96794615 (+)
CBA/J	MGP_CBAJ_G0003827	antisense lncRNA gene	Chr4:106260326-106265718 (+)
DBA/2J	MGP_DBA2J_G0003844	antisense lncRNA gene	Chr4:95612228-95614087 (+)
FVB/NJ	MGP_FVBNJ_G0003862	antisense lncRNA gene	Chr4:94457564-94459477 (+)
LP/J	MGP_LPJ_G0003923	antisense lncRNA gene	Chr4:99652159-99655940 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003850	antisense lncRNA gene	Chr4:112003706-112006342 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004030	antisense lncRNA gene	Chr4:98449030-98452057 (+)
PWK/PhJ	MGP_PWKPhJ_G0003753	antisense lncRNA gene	Chr4:93755372-93757584 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0003699	antisense lncRNA gene	Chr4:95899015-95903318 (+)
WSB/EiJ	MGP_WSBEiJ_G0003833	antisense lncRNA gene	Chr4:98588137-98591204 (+)

Homology

• Gene Tree
  Gm12705
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  4
• Chemically induced (other)
  2
• Radiation induced
  1
• Targeted
  1
• Genomic Mutations
  4 involving Gm12705
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000087395 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000087395	Ensembl Gene Model | MGI Sequence Detail	1888	C57BL/6J
transcript	ENSMUST00000129460	Ensembl | MGI Sequence Detail	872	Not Applicable

References

• Summaries
  All 10

  Phenotypes 6
• Earliest
  J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
• Latest
  J:148802 Boles MK, et al., A mouse chromosome 4 balancer ENU-mutagenesis screen isolates eleven lethal lines. BMC Genet. 2009;10:12