Gm11834 Pseudogene Detail

Summary

• Symbol
  Gm11834
• Name
  predicted gene 11834

• Feature Type
  pseudogene
• IDs
  MGI:3650692
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:9958208-9959130 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 4.41 cM

Strain
Comparison

• SNPs within 2kb
  148 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650692	pseudogene	Chr4:9958208-9959130 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0012503	pseudogene	Chr4:6598410-6599332 (+)
A/J	MGP_AJ_G0012497	pseudogene	Chr4:6430553-6431475 (+)
AKR/J	MGP_AKRJ_G0012461	pseudogene	Chr4:6522335-6523257 (+)
BALB/cJ	MGP_BALBcJ_G0012480	pseudogene	Chr4:6406696-6407618 (+)
C3H/HeJ	MGP_C3HHeJ_G0012342	pseudogene	Chr4:6696505-6697427 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012793	pseudogene	Chr4:6937792-6938714 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011150	pseudogene	Chr4:6086283-6087205 (+)
CAST/EiJ	MGP_CASTEiJ_G0012112	pseudogene	Chr4:6629709-6630631 (-)
CBA/J	MGP_CBAJ_G0012322	pseudogene	Chr4:7068367-7069289 (+)
DBA/2J	MGP_DBA2J_G0012376	pseudogene	Chr4:6388369-6389291 (+)
FVB/NJ	MGP_FVBNJ_G0012377	pseudogene	Chr4:6259386-6260308 (+)
LP/J	MGP_LPJ_G0012450	pseudogene	Chr4:6614716-6615638 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012385	pseudogene	Chr4:7240223-7241145 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012797	pseudogene	Chr4:6522419-6523341 (+)
PWK/PhJ	no annotation
SPRET/EiJ	MGP_SPRETEiJ_G0011765	pseudogene	Chr4:6482153-6483074 (+)
WSB/EiJ	MGP_WSBEiJ_G0012135	pseudogene	Chr4:6608310-6609232 (+)

Homology

• Gene Tree
  Gm11834
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000084095 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084095	Ensembl Gene Model | MGI Sequence Detail	923	C57BL/6J
transcript	ENSMUST00000122257	Ensembl | MGI Sequence Detail	585	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;