Gm12074 Pseudogene Detail

Summary

• Symbol
  Gm12074
• Name
  predicted gene 12074

• Feature Type
  pseudogene
• IDs
  MGI:3650755
  NCBI Gene: 100042367
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:27001697-27001915 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 16.01 cM

Strain
Comparison

• SNPs within 2kb
  107 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650755	pseudogene	Chr11:27001697-27001915 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010637	pseudogene	Chr11:24938051-24938269 (+)
A/J	MGP_AJ_G0010632	pseudogene	Chr11:23973613-23973831 (+)
AKR/J	MGP_AKRJ_G0010593	pseudogene	Chr11:24815752-24815970 (+)
BALB/cJ	MGP_BALBcJ_G0010607	pseudogene	Chr11:24122538-24122756 (+)
C3H/HeJ	MGP_C3HHeJ_G0010525	pseudogene	Chr11:24691869-24692087 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010881	pseudogene	Chr11:25879940-25880158 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009529	pseudogene	Chr11:22744304-22744522 (+)
CAST/EiJ	MGP_CASTEiJ_G0010351	pseudogene	Chr11:24750463-24750681 (+)
CBA/J	MGP_CBAJ_G0010497	pseudogene	Chr11:27025930-27026148 (+)
DBA/2J	MGP_DBA2J_G0010532	pseudogene	Chr11:23852199-23852417 (+)
FVB/NJ	MGP_FVBNJ_G0010546	pseudogene	Chr11:23625971-23626189 (+)
LP/J	MGP_LPJ_G0010618	pseudogene	Chr11:25051916-25052134 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010521	pseudogene	Chr11:27696766-27696984 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010856	pseudogene	Chr11:24900312-24900530 (+)
PWK/PhJ	MGP_PWKPhJ_G0010245	pseudogene	Chr11:23967947-23968165 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010057	pseudogene	Chr11:24593349-24593567 (+)
WSB/EiJ	MGP_WSBEiJ_G0010405	pseudogene	Chr11:24569901-24570119 (+)

Homology

• Gene Tree
  Gm12074
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm12074
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000083895 (Evidence)
• NCBI Gene
  100042367

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083895	Ensembl Gene Model | MGI Sequence Detail	219	C57BL/6J
transcript	ENSMUST00000120189	Ensembl | MGI Sequence Detail	219	Not Applicable

References

• Summaries
  All 7

  Phenotypes 3
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6