Gm12752 Pseudogene Detail

Summary

• Symbol
  Gm12752
• Name
  predicted gene 12752

• Feature Type
  pseudogene
• IDs
  MGI:3650845
  NCBI Gene: 100422784
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr4:34380339-34381081 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 16.69 cM

Strain
Comparison

• SNPs within 2kb
  148 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650845	pseudogene	Chr4:34380171-34381081 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0012600	pseudogene	Chr4:31958744-31959554 (-)
A/J	MGP_AJ_G0012590	pseudogene	Chr4:30803102-30803999 (-)
AKR/J	MGP_AKRJ_G0012555	pseudogene	Chr4:31620110-31621570 (-)
BALB/cJ	MGP_BALBcJ_G0012576	pseudogene	Chr4:31079662-31080472 (-)
C3H/HeJ	MGP_C3HHeJ_G0012437	pseudogene	Chr4:31925865-31926827 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0012892	pseudogene	Chr4:33185250-33186060 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011217	pseudogene	Chr4:28936620-28937499 (-)
CAST/EiJ	MGP_CASTEiJ_G0012193	pseudogene	Chr4:31730689-31731532 (-)
CBA/J	MGP_CBAJ_G0012416	pseudogene	Chr4:34268754-34269645 (-)
DBA/2J	MGP_DBA2J_G0012468	pseudogene	Chr4:30795015-30795906 (-)
FVB/NJ	MGP_FVBNJ_G0012473	pseudogene	Chr4:30220175-30221057 (-)
LP/J	MGP_LPJ_G0012542	pseudogene	Chr4:32058248-32059058 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012476	pseudogene	Chr4:36856364-36858440 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012892	pseudogene	Chr4:31638862-31639640 (-)
PWK/PhJ	MGP_PWKPhJ_G0012023	pseudogene	Chr4:30808057-30809774 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0011843	pseudogene	Chr4:31510987-31512990 (-)
WSB/EiJ	MGP_WSBEiJ_G0012217	pseudogene	Chr4:31641588-31642398 (-)

Homology

• Gene Tree
  Gm12752
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Chemically and radiation induced
  1
• Genomic Mutations
  1 involving Gm12752
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000081384 (Evidence)
• NCBI Gene
  100422784

Representative Sequences			Length	Strain/Species
genomic	100422784	NCBI Gene Model | MGI Sequence Detail	743	C57BL/6J

References

• Summaries
  All 6

  Phenotypes 1
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

TSS for Gm12752:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr41189	Chr4:34381082-34381083 (-)	-2 bp