Gm13094 Pseudogene Detail

Summary

• Symbol
  Gm13094
• Name
  predicted gene 13094

• Feature Type
  pseudogene
• IDs
  MGI:3650867
  NCBI Gene: 100041882
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:150312492-150312900 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 81.22 cM

Strain
Comparison

• SNPs within 2kb
  23 from dbSNP Build 142
• Strain Annotations
  12

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650867	pseudogene	Chr4:150312492-150312900 (+)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0012928	pseudogene	Chr4:147711308-147711716 (+)
AKR/J	no annotation
BALB/cJ	MGP_BALBcJ_G0012907	pseudogene	Chr4:148209496-148209904 (+)
C3H/HeJ	MGP_C3HHeJ_G0012760	pseudogene	Chr4:152306549-152306913 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0013263	pseudogene	Chr4:159721353-159721780 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011478	pseudogene	Chr4:140119030-140121242 (+)
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0012729	pseudogene	Chr4:164431137-164431545 (+)
DBA/2J	MGP_DBA2J_G0012804	pseudogene	Chr4:147801579-147801987 (+)
FVB/NJ	MGP_FVBNJ_G0012808	pseudogene	Chr4:146933105-146933513 (+)
LP/J	MGP_LPJ_G0012873	pseudogene	Chr4:154101040-154101448 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0013266	pseudogene	Chr4:152271878-152273488 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0012532	pseudogene	Chr4:152411365-152411773 (+)

Homology

• Gene Tree
  Gm13094
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  14

• Ensembl
  ENSMUSG00000082140 (Evidence)
• NCBI Gene
  100041882

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082140	Ensembl Gene Model | MGI Sequence Detail	409	C57BL/6J
transcript	ENSMUST00000117930	Ensembl | MGI Sequence Detail	409	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;