Gm11498 Pseudogene Detail

Summary

• Symbol
  Gm11498
• Name
  predicted gene 11498

• Feature Type
  pseudogene
• IDs
  MGI:3650889
  NCBI Gene: 100417326
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:91721268-91722216 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 56.10 cM

Strain
Comparison

• SNPs within 2kb
  192 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650889	pseudogene	Chr11:91721245-91722216 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0010817	pseudogene	Chr11:93717553-93718501 (-)
A/J	MGP_AJ_G0010815	pseudogene	Chr11:90050181-90051129 (-)
AKR/J	MGP_AKRJ_G0010774	pseudogene	Chr11:92825227-92826175 (-)
BALB/cJ	MGP_BALBcJ_G0010791	pseudogene	Chr11:90489843-90490791 (-)
C3H/HeJ	MGP_C3HHeJ_G0010697	pseudogene	Chr11:92884111-92885059 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0011064	pseudogene	Chr11:96700482-96701430 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009680	pseudogene	Chr11:87636565-87637517 (-)
CAST/EiJ	MGP_CASTEiJ_G0010519	pseudogene	Chr11:93584205-93585153 (-)
CBA/J	MGP_CBAJ_G0010669	pseudogene	Chr11:100678860-100679808 (-)
DBA/2J	MGP_DBA2J_G0010711	pseudogene	Chr11:89586122-89587070 (-)
FVB/NJ	MGP_FVBNJ_G0010728	pseudogene	Chr11:89068663-89069611 (-)
LP/J	MGP_LPJ_G0010800	pseudogene	Chr11:94286629-94287577 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010702	pseudogene	Chr11:100613150-100614098 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011042	pseudogene	Chr11:93043114-93044062 (-)
PWK/PhJ	MGP_PWKPhJ_G0010408	pseudogene	Chr11:90502744-90503692 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0010225	pseudogene	Chr11:92659241-92660186 (-)
WSB/EiJ	MGP_WSBEiJ_G0010573	pseudogene	Chr11:92931007-92931955 (-)

Homology

• Gene Tree
  Gm11498
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  2
• Targeted
  2
• Genomic Mutations
  2 involving Gm11498
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000081630 (Evidence)
• NCBI Gene
  100417326

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081630	Ensembl Gene Model | MGI Sequence Detail	949	C57BL/6J
transcript	ENSMUST00000120660	Ensembl | MGI Sequence Detail	949	Not Applicable

References

• Summaries
  All 6

  Diseases 1

  Phenotypes 1
• Earliest
  J:109163 Yu YE, et al., A deficiency in the region homologous to human 17q21.33-q23.2 causes heart defects in mice. Genetics. 2006 May;173(1):297-307