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Gm13842 Gene Detail
Summary
  • Symbol
    Gm13842
  • Name
    predicted gene 13842
Location &
Maps
more
  • Sequence Map
    Chr5:116164470-116167289 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 56.10 cM
Strain
Comparison
more
  • SNPs within 2kb
    211 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3650892
 lncRNA gene Chr5:116164470-116167300 (-)
129S1/SvImJ MGP_129S1SvImJ_G0006773
 lincRNA gene Chr5:118961256-118963826 (-)
A/J MGP_AJ_G0006767
 lincRNA gene Chr5:114207942-114211365 (-)
AKR/J MGP_AKRJ_G0006737
 lincRNA gene Chr5:117873710-117876383 (-)
BALB/cJ MGP_BALBcJ_G0006743
 lincRNA gene Chr5:115610030-115612821 (-)
C3H/HeJ MGP_C3HHeJ_G0006688
 lincRNA gene Chr5:118391291-118393932 (-)
C57BL/6NJ MGP_C57BL6NJ_G0006908
 lincRNA gene Chr5:123531544-123535177 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0006163
 lincRNA gene Chr5:108980803-108983706 (-)
CAST/EiJ MGP_CASTEiJ_G0006611
 lincRNA gene Chr5:117351746-117354400 (-)
CBA/J MGP_CBAJ_G0006670
 lincRNA gene Chr5:128266987-128271394 (-)
DBA/2J MGP_DBA2J_G0006690
 lincRNA gene Chr5:114299930-114302721 (-)
FVB/NJ MGP_FVBNJ_G0006714
 lincRNA gene Chr5:113126257-113128899 (-)
LP/J MGP_LPJ_G0006774
 lincRNA gene Chr5:119518459-119521232 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0006698
 lincRNA gene Chr5:132563728-132566589 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0006910
 lincRNA gene Chr5:117355872-117358694 (-)
PWK/PhJ MGP_PWKPhJ_G0006550
 lincRNA gene Chr5:112955322-112958175 (-)
SPRET/EiJ MGP_SPRETEiJ_G0006456
 lincRNA gene Chr5:114905158-114908010 (-)
WSB/EiJ MGP_WSBEiJ_G0006662
 lincRNA gene Chr5:117954542-117957333 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Gm13842
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    27
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000084992 Ensembl Gene Model | MGI Sequence Detail 2820 C57BL/6J ±  kb
transcript ENSMUST00000156331 Ensembl | MGI Sequence Detail 865 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 11
    Phenotypes 5
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
10/29/2024
MGI 6.24 		The Jackson Laboratory