Gm14033 Gene Detail

Summary

• Symbol
  Gm14033
• Name
  predicted gene 14033

• Feature Type
  lncRNA gene
• IDs
  MGI:3650902
  NCBI Gene: 102635878
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr2:55301802-55323447 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 31.65 cM

Strain
Comparison

• SNPs within 2kb
  704 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650902	lncRNA gene	Chr2:55301802-55323447 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0005917	lincRNA gene	Chr2:54852267-54878211 (+)
A/J	MGP_AJ_G0005910	lincRNA gene	Chr2:52760599-52782210 (+)
AKR/J	MGP_AKRJ_G0005885	lincRNA gene	Chr2:54276330-54297993 (+)
BALB/cJ	MGP_BALBcJ_G0005889	lincRNA gene	Chr2:52849784-52872580 (+)
C3H/HeJ	MGP_C3HHeJ_G0005836	lincRNA gene	Chr2:54284947-54311998 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0006049	lincRNA gene	Chr2:56519396-56541910 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005383	lincRNA gene	Chr2:50496807-50517559 (+)
CAST/EiJ	MGP_CASTEiJ_G0005772	lincRNA gene	Chr2:54310063-54332837 (+)
CBA/J	MGP_CBAJ_G0005821	lincRNA gene	Chr2:58634242-58655969 (+)
DBA/2J	MGP_DBA2J_G0005842	lincRNA gene	Chr2:52343180-52368658 (+)
FVB/NJ	MGP_FVBNJ_G0005868	lincRNA gene	Chr2:51982676-52004381 (+)
LP/J	MGP_LPJ_G0005921	lincRNA gene	Chr2:54739267-54760860 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0005855	lincRNA gene	Chr2:59873177-59899799 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0006046	lincRNA gene	Chr2:54182387-54203992 (+)
PWK/PhJ	MGP_PWKPhJ_G0005721	lincRNA gene	Chr2:52167170-52189031 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0005633	lincRNA gene	Chr2:54309162-54330966 (+)
WSB/EiJ	MGP_WSBEiJ_G0005825	lincRNA gene	Chr2:54448576-54470998 (+)

Homology

• Gene Tree
  Gm14033
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm14033
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000087040 (Evidence)
• NCBI Gene
  102635878

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000087040	Ensembl Gene Model | MGI Sequence Detail	21646	C57BL/6J
transcript	ENSMUST00000128307	Ensembl | MGI Sequence Detail	2265	Not Applicable

References

• Summaries
  All 7

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

TSS for Gm14033:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr17776	Chr2:55301825-55301831 (+)	26 bp