Gm13593 Pseudogene Detail

Summary

• Symbol
  Gm13593
• Name
  predicted gene 13593

• Feature Type
  pseudogene
• IDs
  MGI:3650916
  NCBI Gene: 100416175
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:65126534-65127713 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 38.46 cM

Strain
Comparison

• SNPs within 2kb
  141 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650916	pseudogene	Chr2:65126522-65127713 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0011676	pseudogene	Chr2:65091226-65092417 (-)
A/J	MGP_AJ_G0011671	pseudogene	Chr2:62588989-62590180 (-)
AKR/J	MGP_AKRJ_G0011637	pseudogene	Chr2:64260006-64261197 (-)
BALB/cJ	MGP_BALBcJ_G0011652	pseudogene	Chr2:62738046-62739237 (-)
C3H/HeJ	MGP_C3HHeJ_G0011538	pseudogene	Chr2:64427028-64428219 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0011946	pseudogene	Chr2:67010882-67012073 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010465	pseudogene	Chr2:59957243-59958450 (-)
CAST/EiJ	MGP_CASTEiJ_G0011328	pseudogene	Chr2:64478442-64479650 (-)
CBA/J	MGP_CBAJ_G0011511	pseudogene	Chr2:69547671-69548862 (-)
DBA/2J	MGP_DBA2J_G0011566	pseudogene	Chr2:62212387-62213578 (-)
FVB/NJ	MGP_FVBNJ_G0011568	pseudogene	Chr2:61636098-61637289 (-)
LP/J	MGP_LPJ_G0011632	pseudogene	Chr2:64905051-64906242 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011566	pseudogene	Chr2:71490482-71491673 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011938	pseudogene	Chr2:64319253-64320444 (-)
PWK/PhJ	MGP_PWKPhJ_G0011187	pseudogene	Chr2:62035477-62036685 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0011005	pseudogene	Chr2:64478652-64479860 (-)
WSB/EiJ	MGP_WSBEiJ_G0011354	pseudogene	Chr2:64684432-64685623 (-)

Homology

• Gene Tree
  Gm13593
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm13593
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000080766 (Evidence)
• NCBI Gene
  100416175

Representative Sequences			Length	Strain/Species
genomic	100416175	NCBI Gene Model | MGI Sequence Detail	1180	C57BL/6J

References

• Summaries
  All 7

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;