Gm12486 Pseudogene Detail

Summary

• Symbol
  Gm12486
• Name
  predicted gene 12486

• Feature Type
  pseudogene
• IDs
  MGI:3650949
  NCBI Gene: 668578
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:101114175-101114715 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 44.01 cM

Strain
Comparison

• SNPs within 2kb
  36 from dbSNP Build 142
• Strain Annotations
  10

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650949	pseudogene	Chr3:101113980-101114792 (-)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0012310	pseudogene	Chr3:99132842-99133381 (-)
AKR/J	MGP_AKRJ_G0012276	pseudogene	Chr3:101569619-101570159 (-)
BALB/cJ	MGP_BALBcJ_G0012293	pseudogene	Chr3:98884027-98884566 (-)
C3H/HeJ	MGP_C3HHeJ_G0012158	pseudogene	Chr3:101861865-101862404 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0012606	pseudogene	Chr3:106120845-106121381 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010987	pseudogene	Chr3:95327683-95328193 (-)
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0012136	pseudogene	Chr3:109774379-109774918 (-)
DBA/2J	MGP_DBA2J_G0012192	pseudogene	Chr3:98370206-98370746 (-)
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0012612	pseudogene	Chr3:101053428-101053967 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm12486
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm12486
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  14
• RefSeq
  1

• Ensembl
  ENSMUSG00000082415 (Evidence)
• NCBI Gene
  668578

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082415	Ensembl Gene Model | MGI Sequence Detail	541	C57BL/6J
transcript	ENSMUST00000120887	Ensembl | MGI Sequence Detail	541	Not Applicable

References

• Summaries
  All 9

  Diseases 1

  Phenotypes 4
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426