Gm11403 Pseudogene Detail

Summary

• Symbol
  Gm11403
• Name
  predicted gene 11403

• Feature Type
  pseudogene
• IDs
  MGI:3651007
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:67083716-67084084 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 34.91 cM

Strain
Comparison

• SNPs within 2kb
  65 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651007	pseudogene	Chr4:67083716-67084084 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0012693	pseudogene	Chr4:66290118-66290486 (+)
A/J	MGP_AJ_G0012679	pseudogene	Chr4:63916661-63917029 (+)
AKR/J	MGP_AKRJ_G0012651	pseudogene	Chr4:65602101-65602469 (+)
BALB/cJ	MGP_BALBcJ_G0012662	pseudogene	Chr4:64103418-64103786 (+)
C3H/HeJ	MGP_C3HHeJ_G0012522	pseudogene	Chr4:66201474-66201842 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012990	pseudogene	Chr4:68553056-68553424 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011294	pseudogene	Chr4:60987826-60988194 (+)
CAST/EiJ	MGP_CASTEiJ_G0012278	pseudogene	Chr4:64114557-64114925 (+)
CBA/J	MGP_CBAJ_G0012499	pseudogene	Chr4:70863340-70863708 (+)
DBA/2J	MGP_DBA2J_G0012560	pseudogene	Chr4:63726364-63726732 (+)
FVB/NJ	MGP_FVBNJ_G0012561	pseudogene	Chr4:62940789-62941157 (+)
LP/J	MGP_LPJ_G0012632	pseudogene	Chr4:66563965-66564333 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012569	pseudogene	Chr4:74113191-74113559 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012995	pseudogene	Chr4:65744947-65745315 (+)
PWK/PhJ	MGP_PWKPhJ_G0012104	pseudogene	Chr4:62239798-62240166 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0011918	pseudogene	Chr4:63196393-63196761 (+)
WSB/EiJ	MGP_WSBEiJ_G0012300	pseudogene	Chr4:65791982-65792350 (+)

Homology

• Gene Tree
  Gm11403
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000081435 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081435	Ensembl Gene Model | MGI Sequence Detail	369	C57BL/6J
transcript	ENSMUST00000122195	Ensembl | MGI Sequence Detail	369	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;