Gm14339 Gene Detail

Summary

• Symbol
  Gm14339
• Name
  predicted gene 14339

• Feature Type
  lncRNA gene
• IDs
  MGI:3651047
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:180489445-180490839 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 103.43 cM

Strain
Comparison

• SNPs within 2kb
  129 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651047	lncRNA gene	Chr2:180489445-180490839 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0006110	lincRNA gene	Chr2:187409527-187413365 (+)
A/J	MGP_AJ_G0006101	lincRNA gene	Chr2:179696204-179699369 (+)
AKR/J	MGP_AKRJ_G0006077	lincRNA gene	Chr2:185084732-185086104 (+)
BALB/cJ	MGP_BALBcJ_G0006077	lincRNA gene	Chr2:180158371-180159746 (+)
C3H/HeJ	MGP_C3HHeJ_G0006027	lincRNA gene	Chr2:185436966-185438355 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0006239	lincRNA gene	Chr2:192809524-192813357 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005559	lincRNA gene	Chr2:170390527-170391707 (+)
CAST/EiJ	MGP_CASTEiJ_G0005964	lincRNA gene	Chr2:183688456-183690742 (+)
CBA/J	MGP_CBAJ_G0006012	lincRNA gene	Chr2:199806462-199808233 (+)
DBA/2J	MGP_DBA2J_G0006032	lincRNA gene	Chr2:178790092-178794614 (+)
FVB/NJ	MGP_FVBNJ_G0006057	lincRNA gene	Chr2:177406984-177408315 (+)
LP/J	MGP_LPJ_G0006114	lincRNA gene	Chr2:187414795-187416150 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0006046	lincRNA gene	Chr2:202401189-202403678 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0006241	lincRNA gene	Chr2:185043857-185046707 (+)
PWK/PhJ	MGP_PWKPhJ_G0005909	lincRNA gene	Chr2:176316322-176318127 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0005819	lincRNA gene	Chr2:181545482-181546868 (+)
WSB/EiJ	MGP_WSBEiJ_G0006012	lincRNA gene	Chr2:186032319-186035379 (+)

Homology

• Gene Tree
  Gm14339
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000085728 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000085728	Ensembl Gene Model | MGI Sequence Detail	1395	C57BL/6J
transcript	ENSMUST00000146224	Ensembl | MGI Sequence Detail	423	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;