Gm12754 Pseudogene Detail

Summary

• Symbol
  Gm12754
• Name
  predicted gene 12754

• Feature Type
  pseudogene
• IDs
  MGI:3651052
  NCBI Gene: 100422785
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:34389394-34389847 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 16.69 cM

Strain
Comparison

• SNPs within 2kb
  196 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651052	pseudogene	Chr4:34389384-34389963 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0012601	pseudogene	Chr4:31967999-31968452 (-)
A/J	MGP_AJ_G0012591	pseudogene	Chr4:30812641-30813093 (-)
AKR/J	MGP_AKRJ_G0012556	pseudogene	Chr4:31631411-31631863 (-)
BALB/cJ	MGP_BALBcJ_G0012577	pseudogene	Chr4:31088885-31089338 (-)
C3H/HeJ	MGP_C3HHeJ_G0012438	pseudogene	Chr4:31942460-31942912 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0012893	pseudogene	Chr4:33194473-33194926 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011218	pseudogene	Chr4:28946610-28947064 (-)
CAST/EiJ	MGP_CASTEiJ_G0012194	pseudogene	Chr4:31740403-31740856 (-)
CBA/J	MGP_CBAJ_G0012415	pseudogene	Chr4:34259532-34259984 (-)
DBA/2J	MGP_DBA2J_G0012469	pseudogene	Chr4:30804489-30804941 (-)
FVB/NJ	MGP_FVBNJ_G0012474	pseudogene	Chr4:30229750-30230202 (-)
LP/J	MGP_LPJ_G0012543	pseudogene	Chr4:32067737-32068190 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012477	pseudogene	Chr4:36867978-36868430 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012893	pseudogene	Chr4:31648504-31648957 (-)
PWK/PhJ	MGP_PWKPhJ_G0012024	pseudogene	Chr4:30818650-30819103 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0011844	pseudogene	Chr4:31521887-31522340 (-)
WSB/EiJ	MGP_WSBEiJ_G0012218	pseudogene	Chr4:31650773-31651226 (-)

Homology

• Gene Tree
  Gm12754
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Chemically and radiation induced
  1
• Genomic Mutations
  1 involving Gm12754
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000082649 (Evidence)
• NCBI Gene
  100422785

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082649	Ensembl Gene Model | MGI Sequence Detail	454	C57BL/6J
transcript	ENSMUST00000121908	Ensembl | MGI Sequence Detail	454	Not Applicable

References

• Summaries
  All 6

  Phenotypes 1
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;