Gm13350 Pseudogene Detail

Summary

• Symbol
  Gm13350
• Name
  predicted gene 13350

• Feature Type
  pseudogene
• IDs
  MGI:3651066
  NCBI Gene: 100462895
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:18254176-18254654 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 12.90 cM

Strain
Comparison

• SNPs within 2kb
  110 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651066	pseudogene	Chr2:18254056-18254656 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0011544	pseudogene	Chr2:15943984-15944462 (-)
A/J	MGP_AJ_G0011538	pseudogene	Chr2:15315678-15316156 (-)
AKR/J	MGP_AKRJ_G0011504	pseudogene	Chr2:15803276-15803754 (-)
BALB/cJ	MGP_BALBcJ_G0011519	pseudogene	Chr2:15322694-15323172 (-)
C3H/HeJ	MGP_C3HHeJ_G0011404	pseudogene	Chr2:15711878-15712356 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0011811	pseudogene	Chr2:16334615-16335093 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011064	pseudogene	Chr3:123420298-123425696 (-)
CAST/EiJ	MGP_CASTEiJ_G0011206	pseudogene	Chr2:15683910-15684388 (-)
CBA/J	MGP_CBAJ_G0011376	pseudogene	Chr2:17075101-17075579 (-)
DBA/2J	MGP_DBA2J_G0011434	pseudogene	Chr2:15229446-15229924 (-)
FVB/NJ	MGP_FVBNJ_G0011436	pseudogene	Chr2:15025043-15025521 (-)
LP/J	MGP_LPJ_G0011500	pseudogene	Chr2:15804530-15805008 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011434	pseudogene	Chr2:17016810-17017288 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011798	pseudogene	Chr2:15740744-15741222 (-)
PWK/PhJ	MGP_PWKPhJ_G0011063	pseudogene	Chr2:15083861-15084339 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0010891	pseudogene	Chr2:15864299-15864789 (-)
WSB/EiJ	MGP_WSBEiJ_G0011229	pseudogene	Chr2:15837568-15838046 (-)

Homology

• Gene Tree
  Gm13350
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000083070 (Evidence)
• NCBI Gene
  100462895

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083070	Ensembl Gene Model | MGI Sequence Detail	479	C57BL/6J
transcript	ENSMUST00000120519	Ensembl | MGI Sequence Detail	479	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;