Gm11990 Pseudogene Detail

Summary

• Symbol
  Gm11990
• Name
  predicted gene 11990

• Feature Type
  pseudogene
• IDs
  MGI:3651122
  NCBI Gene: 638720
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:8755955-8756725 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 5.57 cM

Strain
Comparison

• SNPs within 2kb
  200 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651122	pseudogene	Chr11:8755952-8756848 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0010581	pseudogene	Chr11:6029322-6031809 (-)
A/J	MGP_AJ_G0010574	pseudogene	Chr11:5781715-5782484 (-)
AKR/J	MGP_AKRJ_G0010535	pseudogene	Chr11:5988668-5989437 (-)
BALB/cJ	MGP_BALBcJ_G0010550	pseudogene	Chr11:5778656-5779425 (-)
C3H/HeJ	MGP_C3HHeJ_G0010471	pseudogene	Chr11:5911351-5912120 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0010819	pseudogene	Chr11:6185296-6186192 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009487	pseudogene	Chr11:5524882-5525647 (-)
CAST/EiJ	MGP_CASTEiJ_G0010295	pseudogene	Chr11:5927765-5928534 (-)
CBA/J	MGP_CBAJ_G0010444	pseudogene	Chr11:6718276-6719045 (-)
DBA/2J	MGP_DBA2J_G0010473	pseudogene	Chr11:5722811-5723580 (-)
FVB/NJ	MGP_FVBNJ_G0010491	pseudogene	Chr11:5694311-5695080 (-)
LP/J	MGP_LPJ_G0010563	pseudogene	Chr11:6071340-6073302 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010467	pseudogene	Chr11:6291134-6291903 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010796	pseudogene	Chr11:6121462-6122358 (-)
PWK/PhJ	MGP_PWKPhJ_G0010196	pseudogene	Chr11:5724273-5725044 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0010010	pseudogene	Chr11:5981925-5982708 (-)
WSB/EiJ	MGP_WSBEiJ_G0010355	pseudogene	Chr11:5873443-5874212 (-)

Homology

• Gene Tree
  Gm11990
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000081539 (Evidence)
• NCBI Gene
  638720

Representative Sequences			Length	Strain/Species
genomic	638720	NCBI Gene Model | MGI Sequence Detail	771	C57BL/6J

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;