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Faxdc2 Gene Detail
Summary
  • Symbol
    Faxdc2
  • Name
    fatty acid hydroxylase domain containing 2
  • Synonyms
    Gm12248
  • Feature Type
    protein coding gene
  • IDs
    MGI:3651124
    NCBI Gene: 676527
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:57954508-57983977 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 35.63 cM
Strain
Comparison
more
  • SNPs within 2kb
    831 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3651124
 protein coding gene Chr11:57954378-57983977 (-)
129S1/SvImJ MGP_129S1SvImJ_G0039968
 pseudogene Chr11:57732853-57741859 (-)
A/J MGP_AJ_G0039975
 pseudogene Chr11:55545304-55555822 (-)
AKR/J MGP_AKRJ_G0039895
 pseudogene Chr11:57378611-57387465 (-)
BALB/cJ MGP_BALBcJ_G0039953
 pseudogene Chr11:55890274-55899268 (-)
C3H/HeJ MGP_C3HHeJ_G0039600
 pseudogene Chr11:57300280-57309158 (-)
C57BL/6NJ MGP_C57BL6NJ_G0040532
 pseudogene Chr11:59496674-59506853 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0037089
 pseudogene Chr11:52901185-52910978 (-)
CAST/EiJ MGP_CASTEiJ_G0038708
 pseudogene Chr11:57386815-57395915 (-)
CBA/J MGP_CBAJ_G0039569
 pseudogene Chr11:62251015-62260043 (-)
DBA/2J MGP_DBA2J_G0039766
 pseudogene Chr11:55197156-55206602 (-)
FVB/NJ MGP_FVBNJ_G0039730
 pseudogene Chr11:54895929-54904942 (-)
LP/J MGP_LPJ_G0039802
 pseudogene Chr11:58267428-58276151 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0039715
 pseudogene Chr11:63376412-63385408 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0040623
 pseudogene Chr11:57396797-57407948 (-)
PWK/PhJ MGP_PWKPhJ_G0038386
 pseudogene Chr11:55796299-55805544 (-)
SPRET/EiJ MGP_SPRETEiJ_G0038117
 pseudogene Chr11:57293783-57303043 (-)
WSB/EiJ MGP_WSBEiJ_G0038930
 pseudogene Chr11:57048414-57057133 (-)



Homology
more
  • Human Ortholog
    FAXDC2, fatty acid hydroxylase domain containing 2
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    FAXDC2, fatty acid hydroxylase domain containing 2
  • Synonyms
    C5orf4
  • Links
    NCBI Gene ID: 10826
    neXtProt AC: NX_Q96IV6
    UniProt: Q96IV6

  • Chr Location
    5q33.2; chr5:154818492-154859252 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    6
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    33
  • RefSeq
    4
  • UniProt
    3
Representative SequencesLengthStrain/SpeciesFlank
genomic 676527 NCBI Gene Model | MGI Sequence Detail 29470 C57BL/6J ±  kb
transcript NM_001378239 RefSeq | MGI Sequence Detail 1254 C57BL/6  
polypeptide NP_001365168 RefSeq | MGI Sequence Detail 313 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR006694 Fatty acid hydroxylase
    IPR050307 Sterol Desaturase and Related Enzymes
Other
Accession IDs
less
MGI:7439155
References
more
  • Summaries
    All 14
    Gene Ontology 2
    Phenotypes 6
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory