Gm11490 Pseudogene Detail

Summary

• Symbol
  Gm11490
• Name
  predicted gene 11490

• Feature Type
  pseudogene
• IDs
  MGI:3651137
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:87195499-87195770 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 52.04 cM

Strain
Comparison

• SNPs within 2kb
  22 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651137	pseudogene	Chr11:87195499-87195770 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010808	pseudogene	Chr11:88890558-88890829 (+)
A/J	MGP_AJ_G0010806	pseudogene	Chr11:85476202-85476473 (+)
AKR/J	MGP_AKRJ_G0010765	pseudogene	Chr11:88034786-88035057 (+)
BALB/cJ	MGP_BALBcJ_G0010782	pseudogene	Chr11:85870479-85870750 (+)
C3H/HeJ	MGP_C3HHeJ_G0010688	pseudogene	Chr11:88054050-88054321 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011055	pseudogene	Chr11:91578679-91578950 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009672	pseudogene	Chr11:82505180-82505455 (+)
CAST/EiJ	MGP_CASTEiJ_G0010511	pseudogene	Chr11:88763097-88763368 (+)
CBA/J	MGP_CBAJ_G0010661	pseudogene	Chr11:95430339-95430610 (+)
DBA/2J	MGP_DBA2J_G0010702	pseudogene	Chr11:85035865-85036136 (+)
FVB/NJ	MGP_FVBNJ_G0010719	pseudogene	Chr11:84544395-84544666 (+)
LP/J	MGP_LPJ_G0010791	pseudogene	Chr11:89396511-89396782 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010693	pseudogene	Chr11:95495847-95496118 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011033	pseudogene	Chr11:88268939-88269210 (+)
PWK/PhJ	MGP_PWKPhJ_G0010400	pseudogene	Chr11:85853036-85853307 (+)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0010564	pseudogene	Chr11:88147459-88147730 (+)

Homology

• Gene Tree
  Gm11490
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm11490
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000080976 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000080976	Ensembl Gene Model | MGI Sequence Detail	272	C57BL/6J
transcript	ENSMUST00000118128	Ensembl | MGI Sequence Detail	272	Not Applicable

References

• Summaries
  All 6

  Phenotypes 3
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6