Gm11443 Pseudogene Detail

Summary

• Symbol
  Gm11443
• Name
  predicted gene 11443

• Feature Type
  pseudogene
• IDs
  MGI:3651160
  NCBI Gene: 100861933
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:85841321-85841799 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 51.53 cM

Strain
Comparison

• SNPs within 2kb
  179 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651160	pseudogene	Chr11:85841294-85841799 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010805	pseudogene	Chr11:87486615-87487093 (+)
A/J	MGP_AJ_G0010803	pseudogene	Chr11:84124026-84124504 (+)
AKR/J	MGP_AKRJ_G0010761	pseudogene	Chr11:86641879-86642357 (+)
BALB/cJ	MGP_BALBcJ_G0010778	pseudogene	Chr11:84509993-84510471 (+)
C3H/HeJ	MGP_C3HHeJ_G0010684	pseudogene	Chr11:86665387-86665865 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011052	pseudogene	Chr11:90143890-90144368 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009669	pseudogene	Chr11:81161350-81162030 (+)
CAST/EiJ	MGP_CASTEiJ_G0010507	pseudogene	Chr11:87324474-87324952 (+)
CBA/J	MGP_CBAJ_G0010657	pseudogene	Chr11:93939778-93940256 (+)
DBA/2J	MGP_DBA2J_G0010698	pseudogene	Chr11:83701902-83702380 (+)
FVB/NJ	MGP_FVBNJ_G0010715	pseudogene	Chr11:83196599-83197077 (+)
LP/J	MGP_LPJ_G0010788	pseudogene	Chr11:87986951-87987429 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010689	pseudogene	Chr11:94056965-94057443 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011029	pseudogene	Chr11:86883431-86883909 (+)
PWK/PhJ	MGP_PWKPhJ_G0010396	pseudogene	Chr11:84480844-84481606 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010212	pseudogene	Chr11:86428007-86428482 (+)
WSB/EiJ	MGP_WSBEiJ_G0010562	pseudogene	Chr11:86740673-86741151 (+)

Homology

• Gene Tree
  Gm11443
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm11443
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000081632 (Evidence)
• NCBI Gene
  100861933

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081632	Ensembl Gene Model | MGI Sequence Detail	479	C57BL/6J
transcript	ENSMUST00000118790	Ensembl | MGI Sequence Detail	479	Not Applicable

References

• Summaries
  All 8

  Phenotypes 3
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6