Gm12029 Pseudogene Detail

Summary

• Symbol
  Gm12029
• Name
  predicted gene 12029

• Feature Type
  pseudogene
• IDs
  MGI:3651192
  NCBI Gene: 100862374
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:19733652-19734483 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 12.48 cM

Strain
Comparison

• SNPs within 2kb
  129 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651192	pseudogene	Chr11:19732036-19734504 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010611	pseudogene	Chr11:17232718-17233549 (+)
A/J	MGP_AJ_G0010603	pseudogene	Chr11:16670382-16671213 (+)
AKR/J	MGP_AKRJ_G0010565	pseudogene	Chr11:17254340-17255171 (+)
BALB/cJ	MGP_BALBcJ_G0010579	pseudogene	Chr11:16788653-16789484 (+)
C3H/HeJ	MGP_C3HHeJ_G0010499	pseudogene	Chr11:17172001-17172832 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010851	pseudogene	Chr11:18035027-18035858 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009506	pseudogene	Chr11:15704527-15705361 (+)
CAST/EiJ	MGP_CASTEiJ_G0010324	pseudogene	Chr11:17122617-17123453 (+)
CBA/J	MGP_CBAJ_G0010471	pseudogene	Chr11:18755408-18756239 (+)
DBA/2J	MGP_DBA2J_G0010503	pseudogene	Chr11:16641282-16642113 (+)
FVB/NJ	MGP_FVBNJ_G0010519	pseudogene	Chr11:16379852-16380683 (+)
LP/J	MGP_LPJ_G0010591	pseudogene	Chr11:17407641-17408472 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010495	pseudogene	Chr11:19249831-19250662 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010828	pseudogene	Chr11:17334951-17335782 (+)
PWK/PhJ	MGP_PWKPhJ_G0010222	pseudogene	Chr11:16602669-16603499 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010032	pseudogene	Chr11:17064887-17065718 (+)
WSB/EiJ	MGP_WSBEiJ_G0010381	pseudogene	Chr11:17013958-17014789 (+)

Homology

• Gene Tree
  Gm12029
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm12029
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000081820 (Evidence)
• NCBI Gene
  100862374

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081820	Ensembl Gene Model | MGI Sequence Detail	832	C57BL/6J
transcript	ENSMUST00000120073	Ensembl | MGI Sequence Detail	832	Not Applicable

References

• Summaries
  All 8

  Phenotypes 3
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6