Gm11652 Pseudogene Detail

Summary

• Symbol
  Gm11652
• Name
  predicted gene 11652

• Feature Type
  pseudogene
• IDs
  MGI:3651204
  NCBI Gene: 667737
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:105664344-105665610 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 68.73 cM

Strain
Comparison

• SNPs within 2kb
  77 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651204	pseudogene	Chr11:105664234-105666982 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010859	pseudogene	Chr11:109029813-109031079 (+)
A/J	MGP_AJ_G0010856	pseudogene	Chr11:104372504-104373770 (+)
AKR/J	MGP_AKRJ_G0010816	pseudogene	Chr11:107514493-107515954 (+)
BALB/cJ	MGP_BALBcJ_G0010834	pseudogene	Chr11:104793508-104794774 (+)
C3H/HeJ	MGP_C3HHeJ_G0010735	pseudogene	Chr11:107803049-107804315 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011105	pseudogene	Chr11:112392568-112393834 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009817	pseudogene	Chr13:4736127-4737418 (+)
CAST/EiJ	MGP_CASTEiJ_G0010560	pseudogene	Chr11:108859893-108863219 (+)
CBA/J	MGP_CBAJ_G0010706	pseudogene	Chr11:117066402-117067668 (+)
DBA/2J	MGP_DBA2J_G0010753	pseudogene	Chr11:103868147-103869413 (+)
FVB/NJ	MGP_FVBNJ_G0010873	pseudogene	Chr13:4462085-4463325 (+)
LP/J	MGP_LPJ_G0010841	pseudogene	Chr11:109483685-109484951 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010858	pseudogene	Chr13:5466001-5471344 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011084	pseudogene	Chr11:108002846-108004112 (+)
PWK/PhJ	MGP_PWKPhJ_G0010450	pseudogene	Chr11:104960792-104962077 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010373	pseudogene	Chr13:4766782-4768034 (+)
WSB/EiJ	MGP_WSBEiJ_G0010612	pseudogene	Chr11:107972277-107973543 (+)

Homology

• Gene Tree
  Gm11652
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000083465 (Evidence)
• NCBI Gene
  667737

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083465	Ensembl Gene Model | MGI Sequence Detail	1267	C57BL/6J
transcript	ENSMUST00000117842	Ensembl | MGI Sequence Detail	1267	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;