Gm12814 Pseudogene Detail

Summary

• Symbol
  Gm12814
• Name
  predicted gene 12814

• Feature Type
  pseudogene
• IDs
  MGI:3651208
  NCBI Gene: 630887
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:112423604-112450250 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 51.53 cM

Strain
Comparison

• SNPs within 2kb
  67 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651208	pseudogene	Chr4:112416943-112450498 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0040365	pseudogene	Chr4:112987184-113003812 (+)
A/J	MGP_AJ_G0040342	pseudogene	Chr4:108891644-108914515 (+)
AKR/J	MGP_AKRJ_G0040270	pseudogene	Chr4:111617754-111640606 (+)
BALB/cJ	MGP_BALBcJ_G0040343	pseudogene	Chr4:109602967-109619865 (+)
C3H/HeJ	MGP_C3HHeJ_G0039968	pseudogene	Chr4:112844966-112866367 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0040948	pseudogene	Chr4:117546075-117575438 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0037343	pseudogene	Chr4:104102380-104121626 (+)
CAST/EiJ	MGP_CASTEiJ_G0039042	pseudogene	Chr4:110214432-110230368 (+)
CBA/J	MGP_CBAJ_G0039933	pseudogene	Chr4:120878881-120904759 (+)
DBA/2J	MGP_DBA2J_G0040140	pseudogene	Chr4:109103565-109121372 (+)
FVB/NJ	MGP_FVBNJ_G0040095	pseudogene	Chr4:107861509-107884127 (+)
LP/J	no annotation
NOD/ShiLtJ	MGP_NODShiLtJ_G0040089	pseudogene	Chr4:126306934-126326844 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0041037	pseudogene	Chr4:112297544-112320317 (+)
PWK/PhJ	MGP_PWKPhJ_G0038733	pseudogene	Chr4:106792428-106815848 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0038436	pseudogene	Chr4:109231666-109247910 (+)
WSB/EiJ	MGP_WSBEiJ_G0039285	pseudogene	Chr4:112103471-112119014 (+)

Homology

• Gene Tree
  Gm12814
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  4
• Chemically induced (other)
  2
• Endonuclease-mediated
  1
• Radiation induced
  1
• Genomic Mutations
  4 involving Gm12814
• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  3 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000083753 (Evidence)
• NCBI Gene
  630887

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083753	Ensembl Gene Model | MGI Sequence Detail	26647	C57BL/6J
transcript	ENSMUST00000117091	Ensembl | MGI Sequence Detail	846	Not Applicable

References

• Summaries
  All 10

  Phenotypes 5
• Earliest
  J:262448 Narita T, et al., Mice lacking all of the Skint family genes. Int Immunol. 2018 Apr 26;
• Latest
  J:323863 McKenzie DR, et al., Normality sensing licenses local T cells for innate-like tissue surveillance. Nat Immunol. 2022 Mar;23(3):411-422