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Gm13209 Gene Detail
Summary
  • Symbol
    Gm13209
  • Name
    predicted gene 13209
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3651228
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr4:148669178-148670464 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 78.76 cM
Strain
Comparison
more
  • SNPs within 2kb
    44 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3651228
 lncRNA gene Chr4:148669178-148670464 (-)
129S1/SvImJ MGP_129S1SvImJ_G0003998
 antisense lncRNA gene Chr4:152322137-152323419 (-)
A/J MGP_AJ_G0003979
 antisense lncRNA gene Chr4:146018356-146019638 (-)
AKR/J MGP_AKRJ_G0003956
 antisense lncRNA gene Chr4:149993114-149994396 (-)
BALB/cJ MGP_BALBcJ_G0003965
 antisense lncRNA gene Chr4:146521051-146522333 (-)
C3H/HeJ MGP_C3HHeJ_G0003912
 antisense lncRNA gene Chr4:150555873-150557155 (-)
C57BL/6NJ MGP_C57BL6NJ_G0004114
 antisense lncRNA gene Chr4:157850270-157851556 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003714
 antisense lncRNA gene Chr5:93211635-93213040 (+)
CAST/EiJ MGP_CASTEiJ_G0003875
 antisense lncRNA gene Chr4:147763894-147765182 (-)
CBA/J MGP_CBAJ_G0003905
 antisense lncRNA gene Chr4:162442438-162443720 (-)
DBA/2J MGP_DBA2J_G0003921
 antisense lncRNA gene Chr4:146123215-146124497 (-)
FVB/NJ MGP_FVBNJ_G0003940
 antisense lncRNA gene Chr4:145216379-145217665 (-)
LP/J MGP_LPJ_G0004001
 antisense lncRNA gene Chr4:152277643-152278925 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0003928
 antisense lncRNA gene Chr4:165744868-165746150 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0004108
 antisense lncRNA gene Chr4:150485614-150486896 (-)
PWK/PhJ MGP_PWKPhJ_G0003829
 antisense lncRNA gene Chr4:142114700-142115982 (-)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0003911
 antisense lncRNA gene Chr4:150647726-150649008 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    19
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000087217 Ensembl Gene Model | MGI Sequence Detail 1287 C57BL/6J ±  kb
transcript ENSMUST00000138492 Ensembl | MGI Sequence Detail 494 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 7
    Phenotypes 3
  • Earliest
    J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
  • Latest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory