Gm12010 Pseudogene Detail

Summary

• Symbol
  Gm12010
• Name
  predicted gene 12010

• Feature Type
  pseudogene
• IDs
  MGI:3651312
  NCBI Gene: 100418325
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:15432327-15439453 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 8.72 cM

Strain
Comparison

• SNPs within 2kb
  446 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651312	pseudogene	Chr11:15432306-15439473 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010595	pseudogene	Chr11:12838204-12845634 (+)
A/J	MGP_AJ_G0010587	pseudogene	Chr11:12381533-12391348 (+)
AKR/J	MGP_AKRJ_G0010548	pseudogene	Chr11:12849628-12857970 (+)
BALB/cJ	MGP_BALBcJ_G0010563	pseudogene	Chr11:12515294-12522167 (+)
C3H/HeJ	MGP_C3HHeJ_G0010484	pseudogene	Chr11:12806409-12813229 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010834	pseudogene	Chr11:13365481-13373675 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009497	pseudogene	Chr11:11722867-11726565 (+)
CAST/EiJ	MGP_CASTEiJ_G0010308	pseudogene	Chr11:12769086-12776532 (+)
CBA/J	MGP_CBAJ_G0010456	pseudogene	Chr11:14145226-14156927 (+)
DBA/2J	MGP_DBA2J_G0010487	pseudogene	Chr11:12380763-12388295 (+)
FVB/NJ	MGP_FVBNJ_G0010504	pseudogene	Chr11:12203925-12209354 (+)
LP/J	MGP_LPJ_G0010576	pseudogene	Chr11:13000322-13010795 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010480	pseudogene	Chr11:14457018-14464167 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010811	pseudogene	Chr11:12939711-12948816 (+)
PWK/PhJ	MGP_PWKPhJ_G0010208	pseudogene	Chr11:12384385-12391706 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010021	pseudogene	Chr11:12730811-12738420 (+)
WSB/EiJ	MGP_WSBEiJ_G0010366	pseudogene	Chr11:12623039-12631597 (+)

Homology

• Gene Tree
  Gm12010
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000083292 (Evidence)
• NCBI Gene
  100418325

Representative Sequences			Length	Strain/Species
genomic	100418325	NCBI Gene Model | MGI Sequence Detail	7127	C57BL/6J

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;