Gm12008 Pseudogene Detail

Summary

• Symbol
  Gm12008
• Name
  predicted gene 12008

• Feature Type
  pseudogene
• IDs
  MGI:3651319
  NCBI Gene: 102632442
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:14730027-14730781 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 8.62 cM

Strain
Comparison

• SNPs within 2kb
  164 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651319	pseudogene	Chr11:14720342-14730781 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010593	pseudogene	Chr11:12131153-12131906 (+)
A/J	MGP_AJ_G0010585	pseudogene	Chr11:11697973-11698719 (+)
AKR/J	MGP_AKRJ_G0010546	pseudogene	Chr11:12158915-12159720 (+)
BALB/cJ	MGP_BALBcJ_G0010561	pseudogene	Chr11:11786429-11787175 (+)
C3H/HeJ	MGP_C3HHeJ_G0010482	pseudogene	Chr11:12096258-12098468 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010832	pseudogene	Chr11:12631933-12632683 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009496	pseudogene	Chr11:11107205-11107979 (+)
CAST/EiJ	MGP_CASTEiJ_G0010306	pseudogene	Chr11:12088536-12089283 (+)
CBA/J	MGP_CBAJ_G0010454	pseudogene	Chr11:13359972-13362278 (+)
DBA/2J	MGP_DBA2J_G0010485	pseudogene	Chr11:11643817-11644569 (+)
FVB/NJ	MGP_FVBNJ_G0010502	pseudogene	Chr11:11479467-11480224 (+)
LP/J	MGP_LPJ_G0010574	pseudogene	Chr11:12261166-12261915 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010478	pseudogene	Chr11:13531327-13532073 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010809	pseudogene	Chr11:12234806-12235552 (+)
PWK/PhJ	MGP_PWKPhJ_G0010206	pseudogene	Chr11:11705205-11705952 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010019	pseudogene	Chr11:12059766-12060518 (+)
WSB/EiJ	MGP_WSBEiJ_G0010364	pseudogene	Chr11:11907181-11909316 (+)

Homology

• Gene Tree
  Gm12008
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000082156 (Evidence)
• NCBI Gene
  102632442

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082156	Ensembl Gene Model | MGI Sequence Detail	755	C57BL/6J
transcript	ENSMUST00000117791	Ensembl | MGI Sequence Detail	755	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;