Gm11449 Pseudogene Detail

Summary

• Symbol
  Gm11449
• Name
  predicted gene 11449

• Feature Type
  pseudogene
• IDs
  MGI:3651346
  NCBI Gene: 108168835
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:161324483-161324958 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 81.84 cM

Strain
Comparison

• SNPs within 2kb
  123 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651346	pseudogene	Chr2:161324483-161325030 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0011957	pseudogene	Chr2:166712378-166712853 (-)
A/J	MGP_AJ_G0011953	pseudogene	Chr2:160020624-160021074 (-)
AKR/J	MGP_AKRJ_G0011918	pseudogene	Chr2:164756489-164756964 (-)
BALB/cJ	MGP_BALBcJ_G0011930	pseudogene	Chr2:160347058-160347533 (-)
C3H/HeJ	MGP_C3HHeJ_G0011808	pseudogene	Chr2:165090316-165090791 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0012227	pseudogene	Chr2:171641406-171641881 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0011783	pseudogene	Chr2:177834527-177835002 (-)
DBA/2J	MGP_DBA2J_G0011836	pseudogene	Chr2:159195294-159196550 (-)
FVB/NJ	MGP_FVBNJ_G0011844	pseudogene	Chr2:157587094-157587569 (-)
LP/J	MGP_LPJ_G0011904	pseudogene	Chr2:166821077-166822602 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011843	pseudogene	Chr2:181541046-181543038 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012230	pseudogene	Chr2:164603355-164603830 (-)
PWK/PhJ	MGP_PWKPhJ_G0011443	pseudogene	Chr2:158748789-158749258 (-)
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm11449
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18
• RefSeq
  1

• Ensembl
  ENSMUSG00000083374 (Evidence)
• NCBI Gene
  108168835

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083374	Ensembl Gene Model | MGI Sequence Detail	476	C57BL/6J
transcript	ENSMUST00000119175	Ensembl | MGI Sequence Detail	476	Not Applicable

Molecular
Reagents

• 
  

  Microarray probesets 1

References

• Summaries
  All 6
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:144086 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform. Database Download. 2009;