Gm12512 Pseudogene Detail

Summary

• Symbol
  Gm12512
• Name
  predicted gene 12512

• Feature Type
  pseudogene
• IDs
  MGI:3651362
  NCBI Gene: 108168954
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:55282064-55282280 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 29.66 cM

Strain
Comparison

• SNPs within 2kb
  170 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651362	pseudogene	Chr4:55282064-55282607 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0012669	pseudogene	Chr4:53987414-53987649 (-)
A/J	MGP_AJ_G0012658	pseudogene	Chr4:51908759-51909001 (-)
AKR/J	MGP_AKRJ_G0012628	pseudogene	Chr4:53321853-53322095 (-)
BALB/cJ	MGP_BALBcJ_G0012641	pseudogene	Chr4:52076466-52076708 (-)
C3H/HeJ	MGP_C3HHeJ_G0012500	pseudogene	Chr4:53846012-53846254 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0012967	pseudogene	Chr4:55930394-55930610 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011272	pseudogene	Chr4:48784401-48784643 (-)
CAST/EiJ	MGP_CASTEiJ_G0012256	pseudogene	Chr4:53528855-53529097 (-)
CBA/J	MGP_CBAJ_G0012480	pseudogene	Chr4:57832217-57832459 (-)
DBA/2J	MGP_DBA2J_G0012538	pseudogene	Chr4:51840856-51841098 (-)
FVB/NJ	MGP_FVBNJ_G0012539	pseudogene	Chr4:51062743-51062985 (-)
LP/J	MGP_LPJ_G0012610	pseudogene	Chr4:54078842-54079077 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012547	pseudogene	Chr4:61041835-61042077 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012970	pseudogene	Chr4:53536612-53536854 (-)
PWK/PhJ	MGP_PWKPhJ_G0012083	pseudogene	Chr4:51813358-51813574 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0011896	pseudogene	Chr4:52824789-52825031 (-)
WSB/EiJ	MGP_WSBEiJ_G0012278	pseudogene	Chr4:53447366-53447608 (-)

Homology

• Gene Tree
  Gm12512
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000081542 (Evidence)
• NCBI Gene
  108168954

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081542	Ensembl Gene Model | MGI Sequence Detail	217	C57BL/6J
transcript	ENSMUST00000119620	Ensembl | MGI Sequence Detail	217	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;