Gm13132 Pseudogene Detail

Summary

• Symbol
  Gm13132
• Name
  predicted gene 13132

• Feature Type
  pseudogene
• IDs
  MGI:3651366
  NCBI Gene: 105247227
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:154304998-154305469 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 83.93 cM

Strain
Comparison

• SNPs within 2kb
  152 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651366	pseudogene	Chr4:154300762-154305525 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0012946	pseudogene	Chr4:158479499-158479971 (+)
A/J	MGP_AJ_G0012935	pseudogene	Chr4:151825123-151825594 (+)
AKR/J	MGP_AKRJ_G0012902	pseudogene	Chr4:155971576-155972047 (+)
BALB/cJ	MGP_BALBcJ_G0012914	pseudogene	Chr4:152295407-152295878 (+)
C3H/HeJ	MGP_C3HHeJ_G0012767	pseudogene	Chr4:156506848-156508559 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0013270	pseudogene	Chr4:164143612-164144083 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011483	pseudogene	Chr4:144128958-144129451 (+)
CAST/EiJ	MGP_CASTEiJ_G0012503	pseudogene	Chr4:153908225-153908697 (+)
CBA/J	MGP_CBAJ_G0012736	pseudogene	Chr4:169074894-169075365 (+)
DBA/2J	MGP_DBA2J_G0012810	pseudogene	Chr4:151853585-151854056 (+)
FVB/NJ	MGP_FVBNJ_G0012814	pseudogene	Chr4:151057145-151057616 (+)
LP/J	MGP_LPJ_G0012879	pseudogene	Chr4:158383963-158384434 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012829	pseudogene	Chr4:171987173-171988618 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013271	pseudogene	Chr4:156532866-156533337 (+)
PWK/PhJ	MGP_PWKPhJ_G0012323	pseudogene	Chr4:147935760-147936232 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0012136	pseudogene	Chr4:150831827-150832296 (+)
WSB/EiJ	MGP_WSBEiJ_G0012537	pseudogene	Chr4:156704629-156705101 (+)

Homology

• Gene Tree
  Gm13132
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Targeted
  2
• Genomic Mutations
  2 involving Gm13132
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000081276 (Evidence)
• NCBI Gene
  105247227

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081276	Ensembl Gene Model | MGI Sequence Detail	472	C57BL/6J
transcript	ENSMUST00000121194	Ensembl | MGI Sequence Detail	472	Not Applicable

References

• Summaries
  All 7

  Phenotypes 2
• Earliest
  J:121726 Bagchi A, et al., CHD5 is a tumor suppressor at human 1p36. Cell. 2007 Feb 9;128(3):459-75
• Latest
  J:196071 van der Weyden L, et al., Cancer of mice and men: old twists and new tails. J Pathol. 2013 May;230(1):4-16