Gm14464 Pseudogene Detail

Summary

• Symbol
  Gm14464
• Name
  predicted gene 14464

• Feature Type
  pseudogene
• IDs
  MGI:3651392
  NCBI Gene: 100040476
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:78428013-78429266 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 46.99 cM

Strain
Comparison

• SNPs within 2kb
  231 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651392	pseudogene	Chr2:78427990-78429269 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011712	pseudogene	Chr2:79083534-79084790 (+)
A/J	MGP_AJ_G0011707	pseudogene	Chr2:76039259-76040512 (+)
AKR/J	MGP_AKRJ_G0011674	pseudogene	Chr2:78043225-78044473 (+)
BALB/cJ	MGP_BALBcJ_G0011687	pseudogene	Chr2:76178338-76179583 (+)
C3H/HeJ	MGP_C3HHeJ_G0011574	pseudogene	Chr2:78254385-78255638 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011982	pseudogene	Chr2:81402430-81416815 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010492	pseudogene	Chr2:73345633-73346847 (+)
CAST/EiJ	MGP_CASTEiJ_G0011361	pseudogene	Chr2:78674704-78677811 (+)
CBA/J	MGP_CBAJ_G0011549	pseudogene	Chr2:84353248-84354497 (+)
DBA/2J	MGP_DBA2J_G0011599	pseudogene	Chr2:75604249-75605502 (+)
FVB/NJ	MGP_FVBNJ_G0011604	pseudogene	Chr2:74977284-74978504 (+)
LP/J	MGP_LPJ_G0011669	pseudogene	Chr2:78960679-78961931 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011605	pseudogene	Chr2:86218418-86219618 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011978	pseudogene	Chr2:78186116-78187369 (+)
PWK/PhJ	MGP_PWKPhJ_G0011214	pseudogene	Chr2:75542162-75543423 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0011038	pseudogene	Chr2:78489132-78490358 (+)
WSB/EiJ	MGP_WSBEiJ_G0011388	pseudogene	Chr2:78821645-78822925 (+)

Homology

• Gene Tree
  Gm14464
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Targeted
  2
• Genomic Mutations
  3 involving Gm14464
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000082046 (Evidence)
• NCBI Gene
  100040476

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082046	Ensembl Gene Model | MGI Sequence Detail	1254	C57BL/6J
transcript	ENSMUST00000119658	Ensembl | MGI Sequence Detail	1254	Not Applicable

References

• Summaries
  All 10

  Phenotypes 5
• Earliest
  J:100298 Spitz F, et al., Inversion-induced disruption of the Hoxd cluster leads to the partition of regulatory landscapes. Nat Genet. 2005 Aug;37(8):889-93
• Latest
  J:269738 Guerreiro I, et al., Reorganisation of Hoxd regulatory landscapes during the evolution of a snake-like body plan. Elife. 2016 Aug 1;5:e16087