Gm14020 Pseudogene Detail

Summary

• Symbol
  Gm14020
• Name
  predicted gene 14020

• Feature Type
  pseudogene
• IDs
  MGI:3651446
  NCBI Gene: 100417270
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr2:121549011-121549672 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 60.43 cM

Strain
Comparison

• SNPs within 2kb
  120 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651446	pseudogene	Chr2:121548980-121549775 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011846	pseudogene	Chr2:124664039-124664717 (+)
A/J	MGP_AJ_G0011837	pseudogene	Chr2:119572255-119572933 (+)
AKR/J	MGP_AKRJ_G0011805	pseudogene	Chr2:122936937-122937615 (+)
BALB/cJ	MGP_BALBcJ_G0011816	pseudogene	Chr2:119801036-119801714 (+)
C3H/HeJ	MGP_C3HHeJ_G0011699	pseudogene	Chr2:123396142-123396820 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012118	pseudogene	Chr2:128724041-128724702 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010603	pseudogene	Chr2:114568462-114569152 (+)
CAST/EiJ	MGP_CASTEiJ_G0011487	pseudogene	Chr2:123734276-123734937 (+)
CBA/J	MGP_CBAJ_G0011674	pseudogene	Chr2:133238168-133238846 (+)
DBA/2J	MGP_DBA2J_G0011729	pseudogene	Chr2:118972326-118973004 (+)
FVB/NJ	MGP_FVBNJ_G0011732	pseudogene	Chr2:117783811-117784489 (+)
LP/J	MGP_LPJ_G0011796	pseudogene	Chr2:124919839-124920517 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011736	pseudogene	Chr2:137483349-137484027 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012113	pseudogene	Chr2:123043535-123044213 (+)
PWK/PhJ	MGP_PWKPhJ_G0011335	pseudogene	Chr2:118584502-118585163 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0011155	pseudogene	Chr2:122202864-122203540 (+)
WSB/EiJ	MGP_WSBEiJ_G0011509	pseudogene	Chr2:123888098-123888776 (+)

Homology

• Gene Tree
  Gm14020
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm14020
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000084244 (Evidence)
• NCBI Gene
  100417270

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084244	Ensembl Gene Model | MGI Sequence Detail	662	C57BL/6J
transcript	ENSMUST00000118165	Ensembl | MGI Sequence Detail	662	Not Applicable

References

• Summaries
  All 8

  Phenotypes 3
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17

TSS for Gm14020:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr19782	Chr2:121548986-121548990 (+)	-23 bp