Gm13449 Gene Detail

Summary

• Symbol
  Gm13449
• Name
  predicted gene 13449

• Feature Type
  lncRNA gene
• IDs
  MGI:3651453
  NCBI Gene: 118568511
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:34888869-34905081 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 23.24 cM

Strain
Comparison

• SNPs within 2kb
  514 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651453	lncRNA gene	Chr2:34883985-34905081 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0003552	antisense lncRNA gene	Chr2:33608300-33630328 (+)
A/J	MGP_AJ_G0003532	antisense lncRNA gene	Chr2:32185567-32204993 (+)
AKR/J	MGP_AKRJ_G0003511	antisense lncRNA gene	Chr2:33319275-33338707 (+)
BALB/cJ	MGP_BALBcJ_G0003521	antisense lncRNA gene	Chr2:32293296-32313338 (+)
C3H/HeJ	MGP_C3HHeJ_G0003469	antisense lncRNA gene	Chr2:33216743-33236172 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003659	antisense lncRNA gene	Chr2:34586532-34605963 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003169	antisense lncRNA gene	Chr2:30873398-30893235 (+)
CAST/EiJ	MGP_CASTEiJ_G0003432	antisense lncRNA gene	Chr2:33197208-33219110 (+)
CBA/J	MGP_CBAJ_G0003466	antisense lncRNA gene	Chr2:35918253-35937758 (+)
DBA/2J	MGP_DBA2J_G0003474	antisense lncRNA gene	Chr2:31952252-31971647 (+)
FVB/NJ	MGP_FVBNJ_G0003493	antisense lncRNA gene	Chr2:31854303-31873743 (+)
LP/J	MGP_LPJ_G0003547	antisense lncRNA gene	Chr2:33535066-33554512 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003481	antisense lncRNA gene	Chr2:35440106-35459498 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003662	antisense lncRNA gene	Chr2:33205716-33225223 (+)
PWK/PhJ	MGP_PWKPhJ_G0003387	antisense lncRNA gene	Chr2:31865363-31885171 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0003332	antisense lncRNA gene	Chr2:33374111-33393524 (+)
WSB/EiJ	MGP_WSBEiJ_G0003467	antisense lncRNA gene	Chr2:33386355-33406970 (+)

Homology

• Gene Tree
  Gm13449
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  2

• Ensembl
  ENSMUSG00000085599 (Evidence)
• NCBI Gene
  118568511

Representative Sequences			Length	Strain/Species
genomic	118568511	NCBI Gene Model | MGI Sequence Detail	16213	C57BL/6J
transcript	XR_004940893	RefSeq | MGI Sequence Detail	3484	C57BL/6J

References

• Summaries
  All 6
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;