Gm13537 Pseudogene Detail

Summary

• Symbol
  Gm13537
• Name
  predicted gene 13537

• Feature Type
  pseudogene
• IDs
  MGI:3651462
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:33213183-33213449 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 22.41 cM

Strain
Comparison

• SNPs within 2kb
  71 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651462	pseudogene	Chr2:33213183-33213449 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011581	pseudogene	Chr2:31837815-31840098 (+)
A/J	MGP_AJ_G0011579	pseudogene	Chr2:30484117-30484383 (+)
AKR/J	MGP_AKRJ_G0011544	pseudogene	Chr2:31565955-31566761 (+)
BALB/cJ	MGP_BALBcJ_G0011560	pseudogene	Chr2:30605097-30605329 (+)
C3H/HeJ	MGP_C3HHeJ_G0011444	pseudogene	Chr2:31457760-31458026 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011852	pseudogene	Chr2:32781063-32781329 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009908	pseudogene	Chr13:103452938-103453165 (+)
CAST/EiJ	MGP_CASTEiJ_G0011244	pseudogene	Chr2:31425923-31426189 (+)
CBA/J	MGP_CBAJ_G0011417	pseudogene	Chr2:34033837-34034103 (+)
DBA/2J	MGP_DBA2J_G0011474	pseudogene	Chr2:30248502-30248768 (+)
FVB/NJ	MGP_FVBNJ_G0011474	pseudogene	Chr2:30146606-30146872 (+)
LP/J	MGP_LPJ_G0011539	pseudogene	Chr2:31726659-31729103 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011474	pseudogene	Chr2:33628981-33629247 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011842	pseudogene	Chr2:31455452-31455718 (+)
PWK/PhJ	MGP_PWKPhJ_G0011102	pseudogene	Chr2:30163431-30163697 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010922	pseudogene	Chr2:31615998-31619446 (+)
WSB/EiJ	MGP_WSBEiJ_G0011267	pseudogene	Chr2:31637833-31638615 (+)

Homology

• Gene Tree
  Gm13537
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000082844 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082844	Ensembl Gene Model | MGI Sequence Detail	267	C57BL/6J
transcript	ENSMUST00000120467	Ensembl | MGI Sequence Detail	267	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;