Gm13992 Pseudogene Detail

Summary

• Symbol
  Gm13992
• Name
  predicted gene 13992

• Feature Type
  pseudogene
• IDs
  MGI:3651472
  NCBI Gene: 102640391
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:105845545-105845700 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 55.48 cM

Strain
Comparison

• SNPs within 2kb
  123 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651472	pseudogene	Chr2:105845164-105846909 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011806	pseudogene	Chr2:108203621-108203776 (+)
A/J	MGP_AJ_G0011797	pseudogene	Chr2:103693954-103694109 (+)
AKR/J	MGP_AKRJ_G0011765	pseudogene	Chr2:106529249-106529404 (+)
BALB/cJ	MGP_BALBcJ_G0011773	pseudogene	Chr2:103966501-103966656 (+)
C3H/HeJ	MGP_C3HHeJ_G0011661	pseudogene	Chr2:106830235-106830390 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012078	pseudogene	Chr2:111712406-111712561 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010571	pseudogene	Chr2:99486666-99486818 (+)
CAST/EiJ	MGP_CASTEiJ_G0011449	pseudogene	Chr2:107348120-107348275 (+)
CBA/J	MGP_CBAJ_G0011638	pseudogene	Chr2:115605819-115605974 (+)
DBA/2J	MGP_DBA2J_G0011689	pseudogene	Chr2:103246107-103246262 (+)
FVB/NJ	MGP_FVBNJ_G0011691	pseudogene	Chr2:102209902-102210057 (+)
LP/J	MGP_LPJ_G0011758	pseudogene	Chr2:108365583-108365738 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011696	pseudogene	Chr2:119445014-119445169 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012071	pseudogene	Chr2:106710342-106710497 (+)
PWK/PhJ	MGP_PWKPhJ_G0011299	pseudogene	Chr2:102771782-102771937 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0011121	pseudogene	Chr2:105962972-105963522 (+)
WSB/EiJ	MGP_WSBEiJ_G0011474	pseudogene	Chr2:107443599-107443754 (+)

Homology

• Gene Tree
  Gm13992
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm13992
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000083425 (Evidence)
• NCBI Gene
  102640391

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083425	Ensembl Gene Model | MGI Sequence Detail	156	C57BL/6J
transcript	ENSMUST00000120558	Ensembl | MGI Sequence Detail	156	Not Applicable

References

• Summaries
  All 8

  Phenotypes 3
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17